Gene
RNA
| Item | Value |
|---|---|
| gene id | G1335676 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 6529238 ~ 6529840 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1527094 | True | 447 | lncRNA | 0.52 | 2 | 6529238 | 6529840 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491273 | LOC106578809 | coding | upstream | 146682 | 6334443 ~ 6382556 (+) |
| LOC110491277 | LOC106578812 | coding | upstream | 171389 | 6333340 ~ 6357849 (+) |
| slc29a3 | slc29a3 | coding | upstream | 240094 | 6252683 ~ 6289144 (+) |
| LOC118939486 | unc5b | coding | upstream | 312416 | 6123627 ~ 6216822 (+) |
| ly6pge | LOC106578825 | coding | upstream | 857132 | 5658729 ~ 5672106 (+) |
| oit3 | oit3 | coding | downstream | 149875 | 6679715 ~ 6704779 (+) |
| kif20ba | LOC106589940 | coding | downstream | 495130 | 7024970 ~ 7073332 (+) |
| zgc:65997 | LOC106578833 | coding | downstream | 595907 | 7125747 ~ 7128548 (+) |
| pank1a | LOC106578834 | coding | downstream | 601207 | 7131047 ~ 7156797 (+) |
| LOC110491290 | cisd1 | coding | downstream | 634596 | 7164436 ~ 7171710 (+) |
| G1335663 | NA | non-coding | upstream | 20149 | 6506253 ~ 6509089 (+) |
| G1335613 | NA | non-coding | upstream | 55250 | 6386529 ~ 6473988 (+) |
| G1335645 | NA | non-coding | upstream | 65222 | 6463466 ~ 6464016 (+) |
| G1335618 | NA | non-coding | upstream | 138106 | 6390850 ~ 6391132 (+) |
| G1335679 | NA | non-coding | downstream | 8471 | 6538311 ~ 6538918 (+) |
| G1335680 | NA | non-coding | downstream | 9609 | 6539449 ~ 6540326 (+) |
| G1335674 | NA | non-coding | downstream | 13515 | 6543355 ~ 6544169 (+) |
| G1335691 | NA | non-coding | downstream | 29007 | 6558847 ~ 6560964 (+) |
| G1335702 | NA | non-coding | downstream | 56129 | 6585969 ~ 6588067 (+) |
| G1334592 | NA | other | upstream | 824292 | 5703835 ~ 5704946 (+) |
| G1334530 | NA | other | upstream | 1008008 | 5519940 ~ 5521230 (+) |
| LOC110491218 | LOC106578757 | other | upstream | 1591559 | 4640198 ~ 4973348 (+) |
| G1333963 | NA | other | upstream | 2188370 | 4339838 ~ 4341823 (+) |
| G1332826 | NA | other | upstream | 3297831 | 3230199 ~ 3231407 (+) |
| G1335704 | NA | other | downstream | 61136 | 6590976 ~ 6591915 (+) |
| G1335763 | NA | other | downstream | 234472 | 6764312 ~ 6768586 (+) |
| G1335921 | NA | other | downstream | 529061 | 7058901 ~ 7059543 (+) |
| G1336428 | NA | other | downstream | 577631 | 7107471 ~ 7108714 (+) |
