G1335679


Basic Information

Item Value
gene id G1335679
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 6538311 ~ 6538918 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1527097
GTTCCTTTAAACCAATAGTATCGACTGTCCAGCGGGCTGTTCTTTTAAACCAATAGTATCGACTGTCCTGCGGGCTGTTCTTTTTAAACCAATAGTATCGACAGTGAGCCGTCTTGCATCGTACTTTGCTCTCTCACAGCTACAGTGTCTGCACATGTGCATGGGTTCCCTTCACGCTCCTACAACGTGGTAGACACAGGACCAAAACAGAGGAGAAGTTTAGCCTTGTCTTCCAAACGCTCTTAGTTGTAAATTGACCTGAATGCTGTTTATTTTGTCCATCTACTTCATATCGCTGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1527097 True 301 lncRNA 0.45 2 6538311 6538918

Neighbor

gene id symbol gene type direction distance location
LOC110491273 LOC106578809 coding upstream 155755 6334443 ~ 6382556 (+)
LOC110491277 LOC106578812 coding upstream 180462 6333340 ~ 6357849 (+)
slc29a3 slc29a3 coding upstream 249167 6252683 ~ 6289144 (+)
LOC118939486 unc5b coding upstream 321489 6123627 ~ 6216822 (+)
ly6pge LOC106578825 coding upstream 866205 5658729 ~ 5672106 (+)
oit3 oit3 coding downstream 140797 6679715 ~ 6704779 (+)
kif20ba LOC106589940 coding downstream 486052 7024970 ~ 7073332 (+)
zgc:65997 LOC106578833 coding downstream 586829 7125747 ~ 7128548 (+)
pank1a LOC106578834 coding downstream 592129 7131047 ~ 7156797 (+)
LOC110491290 cisd1 coding downstream 625518 7164436 ~ 7171710 (+)
G1335676 NA non-coding upstream 8471 6529238 ~ 6529840 (+)
G1335663 NA non-coding upstream 29222 6506253 ~ 6509089 (+)
G1335613 NA non-coding upstream 64323 6386529 ~ 6473988 (+)
G1335645 NA non-coding upstream 74295 6463466 ~ 6464016 (+)
G1335618 NA non-coding upstream 147179 6390850 ~ 6391132 (+)
G1335680 NA non-coding downstream 531 6539449 ~ 6540326 (+)
G1335674 NA non-coding downstream 4437 6543355 ~ 6544169 (+)
G1335691 NA non-coding downstream 19929 6558847 ~ 6560964 (+)
G1335702 NA non-coding downstream 47051 6585969 ~ 6588067 (+)
G1335711 NA non-coding downstream 72555 6611473 ~ 6611899 (+)
G1334592 NA other upstream 833365 5703835 ~ 5704946 (+)
G1334530 NA other upstream 1017081 5519940 ~ 5521230 (+)
LOC110491218 LOC106578757 other upstream 1600632 4640198 ~ 4973348 (+)
G1333963 NA other upstream 2197443 4339838 ~ 4341823 (+)
G1332826 NA other upstream 3306904 3230199 ~ 3231407 (+)
G1335704 NA other downstream 52058 6590976 ~ 6591915 (+)
G1335763 NA other downstream 225394 6764312 ~ 6768586 (+)
G1335921 NA other downstream 519983 7058901 ~ 7059543 (+)
G1336428 NA other downstream 568553 7107471 ~ 7108714 (+)

Expression


Co-expression Network