G1335702


Basic Information

Item Value
gene id G1335702
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 6585969 ~ 6588067 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1527125
tcctcctagtgctgcaggagatgacctgtacccctcctcctccttctcctagtgctgcaggagatgacctgtacccctcctcctcctagtgctgcaggagatggcCTGTACCCCTCCTCCTAGTGCTGCAGGAGATGGCCtgtacccctcctccccttccagaCTCATACACCACATATTCTGCTCTgacctacagtgtgtgtgtgtgtgtgtgtgtgtgtgagacgacAGAGATCATCCTCTCCTCAGTTATTAACAGTGAGTTGGCAGGTAGCTCTGCAATGGTTCACCCTGTGTGAGGACACTGTGTGTGTCACGGTGGTTCCCTGTGTGAGGACTGTGTGTGTTTCACGGTGGTTCCCTGGCTTACTGCAGATCTGCTCCACAGTGTCCTCTAGGGAGGTCATTAGGGCCGAGGAAAACGAGATGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1527125 True 432 lncRNA 0.55 3 6585969 6588067

Neighbor

gene id symbol gene type direction distance location
LOC110491273 LOC106578809 coding upstream 203413 6334443 ~ 6382556 (+)
LOC110491277 LOC106578812 coding upstream 228120 6333340 ~ 6357849 (+)
slc29a3 slc29a3 coding upstream 296825 6252683 ~ 6289144 (+)
LOC118939486 unc5b coding upstream 369147 6123627 ~ 6216822 (+)
ly6pge LOC106578825 coding upstream 913863 5658729 ~ 5672106 (+)
oit3 oit3 coding downstream 91648 6679715 ~ 6704779 (+)
kif20ba LOC106589940 coding downstream 436903 7024970 ~ 7073332 (+)
zgc:65997 LOC106578833 coding downstream 537680 7125747 ~ 7128548 (+)
pank1a LOC106578834 coding downstream 542980 7131047 ~ 7156797 (+)
LOC110491290 cisd1 coding downstream 576369 7164436 ~ 7171710 (+)
G1335653 NA non-coding upstream 12323 6481780 ~ 6573646 (+)
G1335691 NA non-coding upstream 25005 6558847 ~ 6560964 (+)
G1335674 NA non-coding upstream 41800 6543355 ~ 6544169 (+)
G1335680 NA non-coding upstream 45643 6539449 ~ 6540326 (+)
G1335679 NA non-coding upstream 47051 6538311 ~ 6538918 (+)
G1335711 NA non-coding downstream 23406 6611473 ~ 6611899 (+)
G1335723 NA non-coding downstream 40489 6628556 ~ 6628812 (+)
G1335727 NA non-coding downstream 47238 6635305 ~ 6636093 (+)
G1335729 NA non-coding downstream 51527 6639594 ~ 6640183 (+)
G1335731 NA non-coding downstream 53527 6641594 ~ 6646668 (+)
G1334592 NA other upstream 881023 5703835 ~ 5704946 (+)
G1334530 NA other upstream 1064739 5519940 ~ 5521230 (+)
LOC110491218 LOC106578757 other upstream 1648290 4640198 ~ 4973348 (+)
G1333963 NA other upstream 2245101 4339838 ~ 4341823 (+)
G1332826 NA other upstream 3354562 3230199 ~ 3231407 (+)
G1335704 NA other downstream 2909 6590976 ~ 6591915 (+)
G1335763 NA other downstream 176245 6764312 ~ 6768586 (+)
G1335921 NA other downstream 470834 7058901 ~ 7059543 (+)
G1336428 NA other downstream 519404 7107471 ~ 7108714 (+)

Expression


Co-expression Network