Gene
RNA
| Item | Value |
|---|---|
| gene id | G1335723 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 6628556 ~ 6628812 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1527146 | False | 233 | lncRNA | 0.45 | 2 | 6628556 | 6628812 |
| TU1527147 | True | 229 | lncRNA | 0.45 | 2 | 6628556 | 6628812 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491273 | LOC106578809 | coding | upstream | 246000 | 6334443 ~ 6382556 (+) |
| LOC110491277 | LOC106578812 | coding | upstream | 270707 | 6333340 ~ 6357849 (+) |
| slc29a3 | slc29a3 | coding | upstream | 339412 | 6252683 ~ 6289144 (+) |
| LOC118939486 | unc5b | coding | upstream | 411734 | 6123627 ~ 6216822 (+) |
| ly6pge | LOC106578825 | coding | upstream | 956450 | 5658729 ~ 5672106 (+) |
| oit3 | oit3 | coding | downstream | 50903 | 6679715 ~ 6704779 (+) |
| kif20ba | LOC106589940 | coding | downstream | 396158 | 7024970 ~ 7073332 (+) |
| zgc:65997 | LOC106578833 | coding | downstream | 496935 | 7125747 ~ 7128548 (+) |
| pank1a | LOC106578834 | coding | downstream | 502235 | 7131047 ~ 7156797 (+) |
| LOC110491290 | cisd1 | coding | downstream | 535624 | 7164436 ~ 7171710 (+) |
| G1335711 | NA | non-coding | upstream | 16657 | 6611473 ~ 6611899 (+) |
| G1335702 | NA | non-coding | upstream | 40489 | 6585969 ~ 6588067 (+) |
| G1335691 | NA | non-coding | upstream | 67592 | 6558847 ~ 6560964 (+) |
| G1335674 | NA | non-coding | upstream | 84387 | 6543355 ~ 6544169 (+) |
| G1335680 | NA | non-coding | upstream | 88230 | 6539449 ~ 6540326 (+) |
| G1335727 | NA | non-coding | downstream | 6493 | 6635305 ~ 6636093 (+) |
| G1335729 | NA | non-coding | downstream | 10782 | 6639594 ~ 6640183 (+) |
| G1335731 | NA | non-coding | downstream | 12782 | 6641594 ~ 6646668 (+) |
| G1335741 | NA | non-coding | downstream | 76531 | 6705343 ~ 6706440 (+) |
| G1335742 | NA | non-coding | downstream | 77753 | 6706565 ~ 6710420 (+) |
| G1335704 | NA | other | upstream | 36641 | 6590976 ~ 6591915 (+) |
| G1334592 | NA | other | upstream | 923610 | 5703835 ~ 5704946 (+) |
| G1334530 | NA | other | upstream | 1107326 | 5519940 ~ 5521230 (+) |
| LOC110491218 | LOC106578757 | other | upstream | 1690877 | 4640198 ~ 4973348 (+) |
| G1333963 | NA | other | upstream | 2287688 | 4339838 ~ 4341823 (+) |
| G1335763 | NA | other | downstream | 135500 | 6764312 ~ 6768586 (+) |
| G1335921 | NA | other | downstream | 430089 | 7058901 ~ 7059543 (+) |
| G1336428 | NA | other | downstream | 478659 | 7107471 ~ 7108714 (+) |
