Gene
RNA
| Item | Value |
|---|---|
| gene id | G1337137 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 7774830 ~ 7775814 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1528884 | False | 644 | lncRNA | 0.37 | 1 | 7774830 | 7775473 |
| TU1528883 | True | 616 | lncRNA | 0.39 | 1 | 7775199 | 7775814 |
7,771,600
7,772,000
7,772,400
7,772,800
7,773,200
7,773,600
7,774,000
7,774,400
7,774,400
7,774,800
7,775,200
7,775,600
7,776,000
7,776,400
7,776,800
7,777,200
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491304 | LOC106578848 | coding | downstream | 66313 | 7556268 ~ 7708517 (-) |
| LOC110491303 | LOC106578827 | coding | downstream | 158434 | 7610325 ~ 7616396 (-) |
| LOC100313950 | LOC106578846 | coding | downstream | 263676 | 7456934 ~ 7511154 (-) |
| LOC118939503 | NA | coding | downstream | 399234 | 7367607 ~ 7375596 (-) |
| LOC110492811 | LOC106578842 | coding | downstream | 449243 | 7320476 ~ 7325587 (-) |
| LOC110492875 | LOC106578856 | coding | upstream | 2497 | 7777876 ~ 7806345 (-) |
| LOC110492877 | LOC106578857 | coding | upstream | 272317 | 8048131 ~ 8049957 (-) |
| LOC110492812 | LOC106578854 | coding | upstream | 284146 | 8059960 ~ 8151464 (-) |
| LOC110492813 | LOC106578852 | coding | upstream | 418208 | 8194022 ~ 8370572 (-) |
| LOC110491311 | LOC106578860 | coding | upstream | 835721 | 8527747 ~ 8735526 (-) |
| G1337136 | NA | non-coding | downstream | 583 | 7773425 ~ 7774247 (-) |
| G1337139 | NA | non-coding | downstream | 2158 | 7771993 ~ 7772672 (-) |
| G1337138 | NA | non-coding | downstream | 3027 | 7771507 ~ 7771803 (-) |
| G1337144 | NA | non-coding | upstream | 13522 | 7789336 ~ 7792420 (-) |
| G1337159 | NA | non-coding | upstream | 45021 | 7820835 ~ 7821102 (-) |
| G1337220 | NA | non-coding | upstream | 142179 | 7917993 ~ 7918215 (-) |
| G1337248 | NA | non-coding | upstream | 175146 | 7950960 ~ 7951246 (-) |
| LOC110491271 | cssa19h6orf118 | other | downstream | 1022332 | 6738304 ~ 6757114 (-) |
| G1336033 | NA | other | downstream | 1471099 | 6303007 ~ 6303731 (-) |
| G1335308 | NA | other | downstream | 2001686 | 5772733 ~ 5773144 (-) |
| G1335222 | NA | other | downstream | 2121963 | 5624448 ~ 5652867 (-) |
| G1335145 | NA | other | downstream | 2385447 | 5387958 ~ 5389383 (-) |
| G1337783 | NA | other | upstream | 636957 | 8412771 ~ 8413067 (-) |
| G1338014 | NA | other | upstream | 691394 | 8467208 ~ 8470144 (-) |
| LOC110491322 | LOC106589467 | other | upstream | 1357801 | 9133541 ~ 9138698 (-) |
| G1339219 | NA | other | upstream | 1927302 | 9703116 ~ 9703631 (-) |
