G1338571


Basic Information

Item Value
gene id G1338571
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 9178047 ~ 9183173 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1530561
atatatatgcaatcATAGGCTCATTGGTGAAATCAGCAATTAGACAATATCTTTACGTAAATCAAtcaaacctttattaatgcaattacAGACAGAAGTTGCCAACGGGAACATAGCACGCGTGTTTCTGAGTAAGTTCCGCAAAATAGCAAATGGTCCAGTTGTTTTATTATTCCTGCAGTCAACCTCTAGTGATGTCACTGCCTATGTCATTaccttctactcatgagaccaagcACATGCATACACAGCTAAACAAACACTAGTTCCAGTGTTATCTAAAGGCTCAACATCAATTGTCCACTCCCCATGTTGATTTATAGTGGTATGTCAGACTAGTCTATTATTTCTTTCACTCCCCTGCAGGGTTCTGTGTCTTATGAATCTCTTTTATCTTTGAGGCGCTTTCTCACAGACACCCTGTTTTGACTGCAATAACTCACACACCTCTCAGACCGTTTCTTTATAAGAGGCAAAGACTCAAAAATAACTGTGtaacaatattaaagctgataatgattattgttaatctgtagtctaggaccctataaatgtaaggGGGAGGGGTCTTATAACCCTTCCCCTTCtaattaatacaacataagcataattCATTATTATAATTCATCAAAAATGTGGTAAtagcccctatcatgaccccaaggTGAACCCATcagaagcctctccaacataatccaagtagaatcaggaattcctcagggcagctgtctaggccctttACTtgtttcaatctttactaatgacatggcTTTGTTTAAAGgcagtgtctatgtatgcggatgactcaacactatacatgtcagctactacagcgactgaagtGACTGCAACACTTTACAAACACTTTACAAAGTGAATAAATTAGTTGTAAATATTTCTACAActaaaattattttatttgggacaaatcattcactaaaccctaagtctcaaataaatattttaataAACGATGTGGAAATTGAAACAAGTTGAGGTGAACTCTCATGGTCAAAAATTATTGATACAACAGttgctaaaatggggagaagccTGTCCATAATAAATAATGTCCCCAAAGTAAacggctattttgtcaggacaagatgctagaatatgcatataattgacagcttaggatagaaaacactctaaagtttctaaaactgtcaaaatattgtctgtgagtataacagaactgatattgcaggtgaaagcctgagaaaaatccaatcaagaagggactcttatttagaaagctctgcgttcctatgcgtccctattgagcagtgaatgagatatcaaccagattcctgttttctatggcttccctaatgtgtctagtgtcacaatacatagtttcaggcgtttattttgaaaaatgagcctgaacgtcaacattgcatcagtggtcagctgaagtctctcagagtgttttgtgcgtaaaggacaaatgcggccactgtttctctctatcctactaagaagccaccagtcccggttgatatattatcgaatagatatttgaaaaacaccttgaggattgattataaacaatgtttgccatgtttctgtcaatattatggagctaatttggaatatttttcggcattgtagtgaccgcaatttccggtcgatttctcagccaaacgtgaagaagaAACggacatttgctatctaactgggagtctcgtgagtgaaaacatccgaagctcatcaaaggtaaacgatttaatttgattgtttttctgactttcgtcaccaggttgcctgctgctagctagtcataatgctatgctaggctatcgataaacttacacaaatgcttgtctggCTTTGGCTGtgaagcatattttcaaaatctgagatgacagggtgattaacaaaaggctaagctgtgtttcaatatatttaacttgtgattttcatgaataggaatattttctagtaatatttatgtccgttgcgttatgctaattagtgtcagttgatgattacgctcccggacccgggatgggtAGTATCATTAATTAAGTGAAAGTTAAATTACTGACTTAGAAAAATTATCTAAAAAGTACAAGCACTCAAAAAATATCTCAATTACAGTAACGAGAGTATTTGCAGTTTGTTACTTCCACCCCGTGTAACTATTTTTTCATTTTAAAGTGTTTATCATGGATGTAAAGGTGAGAGATGCAAATGCCACCGCAAGAATGTCCCATACACATAAGATATAACATTTATCAATGTTTTAAATCATGAAACCACACAATCATTAGTTGTTAGGCTAGTTATCATGGCCGTGGGTATGTGTGCCCCTTTATGTTCAAGTAAGTCATTTCCGGGAAATATTTCTGTCACTGTAGGGGATCCCTTTTAGCTGAAGAGCACGTCCGTTTAAAAACTCTTTACTGTTAAGAAAAACCCTCCCCTCTGAAGATTTATTTTGTGACGACGGTAACTCTGCGGACAAAATAGGCCGTTCGACAAAGCATTTATGTTTGTGTAATTGTGTAAACACATTGTCACTGCTGTTGTCACTGGTGTATTTCTCTTACCCTTAAAAAAGAAGACCTCTCCTCTGATATTTGCCACAGCATCAAAGCCGCCCTCACAACGACTTTGGAAAGAGCGGTCCGAATGTTTTGTTGGCCTTGGAGGTGGAGGACTGGGCAGGCGAGGGTGACTGGGAGTTGAACCACTGCCACCAGGGTGCACTGCAGGCTTGCTCTCCTTCCTccctggggagagagaaagggtgaatcgtactctctcctcgcctccttctcaaaacgaAATTGGCGGAAAAGGTCAAAAGGGAGGAACGATGGATCTTCTCCAACGCGTTATgacttaaccctttacactcatatcaaatcaaatcaaatgttattagtcacatgcgccgaatacaacagctgtagaccttacagtgaaatgcttacttacaagcccttaaccaacaatgctttaagtaGTTAAGAAAAAagtaaaacattgaaaataaaagtaacaaataattaaacagcagcagtaaaataacaagtaggactatatacagggggtactggtacagagtcaatgtggaggctatatacaggaggtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacagggggtaccgggacagagtcaatgtggaggctatatacagggggtaccggtacagagtcaatgtggaggctatatacaggggataccggtacagagtcaatgtggaggctatatacaggtggtaccggtacagagtcaatgtggacgcTATAttcagggtgtaccggtacagagtcaatgtggaggctatatacagggggtaccggtacagagtcagtgtggaggctatatacagggggtaccggtacatagtcaatgtggaggctatatacagggggtcccggtacagagtcaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1530561 True 3473 TUCP 0.40 3 9178047 9183173

Neighbor

gene id symbol gene type direction distance location
LOC110491323 NA coding upstream 6568 9163483 ~ 9171479 (+)
LOC110491321 mrpl38 coding upstream 34375 9084767 ~ 9143672 (+)
LOC110491320 LOC106578876 coding upstream 46654 9124217 ~ 9131393 (+)
LOC110492817 LOC106578874 coding upstream 69840 9091144 ~ 9108207 (+)
LOC110492816 LOC106578871 coding upstream 123499 9023761 ~ 9054548 (+)
LOC110491327 LOC106578881 coding downstream 50852 9234025 ~ 9237375 (+)
LOC118939487 ogfod3 coding downstream 55808 9238981 ~ 9255876 (+)
galk1 galk1 coding downstream 1044045 10227218 ~ 10237422 (+)
llgl2 LOC106578897 coding downstream 1054381 10237554 ~ 10270791 (+)
myo15b LOC106578894 coding downstream 1106680 10289853 ~ 10320827 (+)
G1338569 NA non-coding upstream 4051 9173810 ~ 9173996 (+)
G1338572 NA non-coding upstream 12027 9165803 ~ 9166020 (+)
G1338556 NA non-coding upstream 31538 9146272 ~ 9146509 (+)
G1338551 NA non-coding upstream 51639 9126044 ~ 9126408 (+)
G1338578 NA non-coding downstream 24654 9207827 ~ 9208112 (+)
G1338579 NA non-coding downstream 25226 9208399 ~ 9208740 (+)
G1338597 NA non-coding downstream 48141 9231314 ~ 9231824 (+)
G1338736 NA non-coding downstream 129149 9312322 ~ 9312624 (+)
G1338738 NA non-coding downstream 131209 9314382 ~ 9314587 (+)
G1338523 NA other upstream 114901 9060652 ~ 9063146 (+)
LOC110492815 LOC106578870 other upstream 169303 8978243 ~ 9008786 (+)
G1337942 NA other upstream 538876 8637166 ~ 8639171 (+)
G1337438 NA other upstream 970674 8206833 ~ 8207373 (+)
G1339018 NA other downstream 442766 9625939 ~ 9626400 (+)
G1339045 NA other downstream 518802 9701975 ~ 9702380 (+)
G1339525 NA other downstream 876705 10059878 ~ 10060130 (+)
G1341172 NA other downstream 2598555 11781728 ~ 11782891 (+)
LOC110492879 NA other downstream 2774353 11952562 ~ 11958858 (+)

Expression


Co-expression Network