G1339068



Basic Information


Item Value
gene id G1339068
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 9742361 ~ 9742760 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1531104
gagatgttcgacaagcaggtgtccacatacttttgcagtGTCCACATGCAGtgaatatatttccacactatgaggttggaatattactgtgaaattgtgaaaatgatgacaatgcccttttagtgtaagagttgtttgaaaagaccacctgaaatttcagcctgttttggtgggatggagttttggccttcctggtgacatcaccatgcagtaaattagttaatagaccaataagacacagagttccaaacctctctgccaataacagcacatTTTCAGTTTTCCAGACTAGTTTTCCAGACAACTCACAGACTAGTCTTGGCAAAATTATTTTTAAAGAAACGCCTCTTTGCTAAGAAACTATTTTTGTTTAGTTAGTTTAGGtagttaattgttaccc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1531104 True 400 lncRNA 0.38 1 9742361 9742760

Neighbor


gene id symbol gene type direction distance location
LOC118939487 ogfod3 coding upstream 486485 9238981 ~ 9255876 (+)
LOC110491327 LOC106578881 coding upstream 504986 9234025 ~ 9237375 (+)
LOC110491323 NA coding upstream 570882 9163483 ~ 9171479 (+)
LOC110491321 mrpl38 coding upstream 598689 9084767 ~ 9143672 (+)
LOC110491320 LOC106578876 coding upstream 610968 9124217 ~ 9131393 (+)
galk1 galk1 coding downstream 484458 10227218 ~ 10237422 (+)
llgl2 LOC106578897 coding downstream 494794 10237554 ~ 10270791 (+)
myo15b LOC106578894 coding downstream 547093 10289853 ~ 10320827 (+)
LOC110491336 LOC106578893 coding downstream 587318 10330078 ~ 10373090 (+)
LOC110491338 LOC106589448 coding downstream 636063 10378823 ~ 10407995 (+)
G1339058 NA non-coding upstream 12567 9729555 ~ 9729794 (+)
G1339057 NA non-coding upstream 13982 9727366 ~ 9728379 (+)
G1339053 NA non-coding upstream 23837 9718105 ~ 9718524 (+)
G1339048 NA non-coding upstream 36400 9705468 ~ 9705961 (+)
G1339047 NA non-coding upstream 37558 9704478 ~ 9704803 (+)
G1339078 LOC106578905 non-coding downstream 19699 9762459 ~ 9762770 (+)
G1339079 NA non-coding downstream 20122 9762882 ~ 9764641 (+)
G1339083 NA non-coding downstream 34488 9777248 ~ 9777486 (+)
G1339091 NA non-coding downstream 49251 9792011 ~ 9792229 (+)
G1339098 NA non-coding downstream 65868 9808628 ~ 9808850 (+)
G1339045 NA other upstream 39981 9701975 ~ 9702380 (+)
G1339018 NA other upstream 115961 9625939 ~ 9626400 (+)
G1338571 NA other upstream 559188 9178047 ~ 9183173 (+)
LOC110492817 LOC106578874 other upstream 647997 9091144 ~ 9108207 (+)
G1338523 NA other upstream 679215 9060652 ~ 9063146 (+)
G1339525 NA other downstream 317118 10059878 ~ 10060130 (+)
G1341172 NA other downstream 2038968 11781728 ~ 11782891 (+)
LOC110492879 NA other downstream 2214766 11952562 ~ 11958858 (+)
G1341689 NA other downstream 2481013 12223773 ~ 12229068 (+)
LOC110491388 LOC106578938 other downstream 2650194 12392917 ~ 12396813 (+)

Expression



Co-expression Network