Gene
RNA
| Item | Value |
|---|---|
| gene id | G1339499 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 10039134 ~ 10039413 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1531570 | True | 280 | lncRNA | 0.42 | 1 | 10039134 | 10039413 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939487 | ogfod3 | coding | upstream | 783258 | 9238981 ~ 9255876 (+) |
| LOC110491327 | LOC106578881 | coding | upstream | 801759 | 9234025 ~ 9237375 (+) |
| LOC110491323 | NA | coding | upstream | 867655 | 9163483 ~ 9171479 (+) |
| LOC110491321 | mrpl38 | coding | upstream | 895462 | 9084767 ~ 9143672 (+) |
| LOC110491320 | LOC106578876 | coding | upstream | 907741 | 9124217 ~ 9131393 (+) |
| galk1 | galk1 | coding | downstream | 187805 | 10227218 ~ 10237422 (+) |
| llgl2 | LOC106578897 | coding | downstream | 198141 | 10237554 ~ 10270791 (+) |
| myo15b | LOC106578894 | coding | downstream | 250440 | 10289853 ~ 10320827 (+) |
| LOC110491336 | LOC106578893 | coding | downstream | 290665 | 10330078 ~ 10373090 (+) |
| LOC110491338 | LOC106589448 | coding | downstream | 339410 | 10378823 ~ 10407995 (+) |
| G1339496 | NA | non-coding | upstream | 2775 | 10033035 ~ 10036359 (+) |
| G1339381 | NA | non-coding | upstream | 19375 | 10019216 ~ 10019759 (+) |
| G1339109 | LOC105023045 | non-coding | upstream | 215534 | 9823061 ~ 9823600 (+) |
| G1339103 | NA | non-coding | upstream | 224628 | 9814280 ~ 9814506 (+) |
| G1339098 | NA | non-coding | upstream | 230284 | 9808628 ~ 9808850 (+) |
| G1339529 | LOC106562530 | non-coding | downstream | 23686 | 10063099 ~ 10063499 (+) |
| G1339569 | NA | non-coding | downstream | 72246 | 10111659 ~ 10111893 (+) |
| G1339572 | NA | non-coding | downstream | 73706 | 10113119 ~ 10113545 (+) |
| G1339576 | NA | non-coding | downstream | 80114 | 10119527 ~ 10119742 (+) |
| G1339579 | LOC106599233 | non-coding | downstream | 81577 | 10120990 ~ 10121518 (+) |
| G1339045 | NA | other | upstream | 336754 | 9701975 ~ 9702380 (+) |
| G1339018 | NA | other | upstream | 412734 | 9625939 ~ 9626400 (+) |
| G1338571 | NA | other | upstream | 855961 | 9178047 ~ 9183173 (+) |
| LOC110492817 | LOC106578874 | other | upstream | 944770 | 9091144 ~ 9108207 (+) |
| G1338523 | NA | other | upstream | 975988 | 9060652 ~ 9063146 (+) |
| G1339525 | NA | other | downstream | 20465 | 10059878 ~ 10060130 (+) |
| G1341172 | NA | other | downstream | 1742315 | 11781728 ~ 11782891 (+) |
| LOC110492879 | NA | other | downstream | 1918113 | 11952562 ~ 11958858 (+) |
| G1341689 | NA | other | downstream | 2184360 | 12223773 ~ 12229068 (+) |
| LOC110491388 | LOC106578938 | other | downstream | 2353541 | 12392917 ~ 12396813 (+) |
