G1339569


Basic Information

Item Value
gene id G1339569
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 10111659 ~ 10111893 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1531640
gccctaaacagagaatacacagtggcagaatacctgaccactgtcacTGACCCAAACTCAAGGAGAGCTTTGACTATGTAccgactcagtgagcatagccttgctattgagaaaggccgccatagacAGACAAGggtctcaagagaagacaggctattttcacactgcccacaaaatgaggtggaaactgagctgcacttcctaacctcctgcccaatgtatgaccatattagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1531640 True 235 lncRNA 0.48 1 10111659 10111893

Neighbor

gene id symbol gene type direction distance location
LOC118939487 ogfod3 coding upstream 855783 9238981 ~ 9255876 (+)
LOC110491327 LOC106578881 coding upstream 874284 9234025 ~ 9237375 (+)
LOC110491323 NA coding upstream 940180 9163483 ~ 9171479 (+)
LOC110491321 mrpl38 coding upstream 967987 9084767 ~ 9143672 (+)
LOC110491320 LOC106578876 coding upstream 980266 9124217 ~ 9131393 (+)
galk1 galk1 coding downstream 115325 10227218 ~ 10237422 (+)
llgl2 LOC106578897 coding downstream 125661 10237554 ~ 10270791 (+)
myo15b LOC106578894 coding downstream 177960 10289853 ~ 10320827 (+)
LOC110491336 LOC106578893 coding downstream 218185 10330078 ~ 10373090 (+)
LOC110491338 LOC106589448 coding downstream 266930 10378823 ~ 10407995 (+)
G1339529 LOC106562530 non-coding upstream 48160 10063099 ~ 10063499 (+)
G1339499 NA non-coding upstream 72246 10039134 ~ 10039413 (+)
G1339496 NA non-coding upstream 75300 10033035 ~ 10036359 (+)
G1339381 NA non-coding upstream 91900 10019216 ~ 10019759 (+)
G1339109 LOC105023045 non-coding upstream 288059 9823061 ~ 9823600 (+)
G1339572 NA non-coding downstream 1226 10113119 ~ 10113545 (+)
G1339576 NA non-coding downstream 7634 10119527 ~ 10119742 (+)
G1339579 LOC106599233 non-coding downstream 9097 10120990 ~ 10121518 (+)
G1339581 NA non-coding downstream 10293 10122186 ~ 10122521 (+)
G1339587 NA non-coding downstream 19612 10131505 ~ 10131769 (+)
G1339525 NA other upstream 51529 10059878 ~ 10060130 (+)
G1339045 NA other upstream 409279 9701975 ~ 9702380 (+)
G1339018 NA other upstream 485259 9625939 ~ 9626400 (+)
G1338571 NA other upstream 928486 9178047 ~ 9183173 (+)
LOC110492817 LOC106578874 other upstream 1017295 9091144 ~ 9108207 (+)
G1341172 NA other downstream 1669835 11781728 ~ 11782891 (+)
LOC110492879 NA other downstream 1845633 11952562 ~ 11958858 (+)
G1341689 NA other downstream 2111880 12223773 ~ 12229068 (+)
LOC110491388 LOC106578938 other downstream 2281061 12392917 ~ 12396813 (+)
LOC110491390 LOC106578939 other downstream 2290343 12402185 ~ 12403794 (+)

Expression


Co-expression Network