Gene
RNA
| Item | Value |
|---|---|
| gene id | G1339572 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 10113119 ~ 10113545 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1531643 | True | 427 | lncRNA | 0.39 | 1 | 10113119 | 10113545 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939487 | ogfod3 | coding | upstream | 857243 | 9238981 ~ 9255876 (+) |
| LOC110491327 | LOC106578881 | coding | upstream | 875744 | 9234025 ~ 9237375 (+) |
| LOC110491323 | NA | coding | upstream | 941640 | 9163483 ~ 9171479 (+) |
| LOC110491321 | mrpl38 | coding | upstream | 969447 | 9084767 ~ 9143672 (+) |
| LOC110491320 | LOC106578876 | coding | upstream | 981726 | 9124217 ~ 9131393 (+) |
| galk1 | galk1 | coding | downstream | 113673 | 10227218 ~ 10237422 (+) |
| llgl2 | LOC106578897 | coding | downstream | 124009 | 10237554 ~ 10270791 (+) |
| myo15b | LOC106578894 | coding | downstream | 176308 | 10289853 ~ 10320827 (+) |
| LOC110491336 | LOC106578893 | coding | downstream | 216533 | 10330078 ~ 10373090 (+) |
| LOC110491338 | LOC106589448 | coding | downstream | 265278 | 10378823 ~ 10407995 (+) |
| G1339569 | NA | non-coding | upstream | 1226 | 10111659 ~ 10111893 (+) |
| G1339529 | LOC106562530 | non-coding | upstream | 49620 | 10063099 ~ 10063499 (+) |
| G1339499 | NA | non-coding | upstream | 73706 | 10039134 ~ 10039413 (+) |
| G1339496 | NA | non-coding | upstream | 76760 | 10033035 ~ 10036359 (+) |
| G1339381 | NA | non-coding | upstream | 93360 | 10019216 ~ 10019759 (+) |
| G1339576 | NA | non-coding | downstream | 5982 | 10119527 ~ 10119742 (+) |
| G1339579 | LOC106599233 | non-coding | downstream | 7445 | 10120990 ~ 10121518 (+) |
| G1339581 | NA | non-coding | downstream | 8641 | 10122186 ~ 10122521 (+) |
| G1339587 | NA | non-coding | downstream | 17960 | 10131505 ~ 10131769 (+) |
| G1339598 | NA | non-coding | downstream | 34318 | 10147863 ~ 10148071 (+) |
| G1339525 | NA | other | upstream | 52989 | 10059878 ~ 10060130 (+) |
| G1339045 | NA | other | upstream | 410739 | 9701975 ~ 9702380 (+) |
| G1339018 | NA | other | upstream | 486719 | 9625939 ~ 9626400 (+) |
| G1338571 | NA | other | upstream | 929946 | 9178047 ~ 9183173 (+) |
| LOC110492817 | LOC106578874 | other | upstream | 1018755 | 9091144 ~ 9108207 (+) |
| G1341172 | NA | other | downstream | 1668183 | 11781728 ~ 11782891 (+) |
| LOC110492879 | NA | other | downstream | 1843981 | 11952562 ~ 11958858 (+) |
| G1341689 | NA | other | downstream | 2110228 | 12223773 ~ 12229068 (+) |
| LOC110491388 | LOC106578938 | other | downstream | 2279409 | 12392917 ~ 12396813 (+) |
| LOC110491390 | LOC106578939 | other | downstream | 2288691 | 12402185 ~ 12403794 (+) |
