Gene
RNA
| Item | Value |
|---|---|
| gene id | G1340764 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 11241494 ~ 11241812 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: general transcription factor II-I repeat domain-containing protein 2B |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1532935 | True | 319 | lncRNA | 0.41 | 1 | 11241494 | 11241812 |
11,238,400
11,238,800
11,239,200
11,239,600
11,240,000
11,240,400
11,240,800
11,240,800
11,241,200
11,241,600
11,242,000
11,242,400
11,242,800
NC_048580.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ca10a | LOC106578887 | coding | downstream | 315289 | 10574498 ~ 10926205 (-) |
| LOC110491339 | NA | coding | downstream | 772848 | 10463727 ~ 10468646 (-) |
| LOC110492824 | LOC106592390 | coding | downstream | 775280 | 10460523 ~ 10466214 (-) |
| LOC100135963 | LOC100135963 | coding | downstream | 817453 | 10409443 ~ 10424041 (-) |
| trnaa-agc-6 | NA | coding | downstream | 1014713 | 10226709 ~ 10226781 (-) |
| LOC110492826 | LOC106590946 | coding | upstream | 294626 | 11536438 ~ 11636884 (-) |
| LOC110491342 | LOC106578908 | coding | upstream | 410617 | 11652429 ~ 11667766 (-) |
| LOC110491344 | LOC106578909 | coding | upstream | 475736 | 11717548 ~ 11726644 (-) |
| LOC118939489 | LOC106578915 | coding | upstream | 552527 | 11794339 ~ 11801864 (-) |
| si:dkey-21e13.3 | LOC106578917 | coding | upstream | 581591 | 11823403 ~ 11839246 (-) |
| G1340680 | NA | non-coding | downstream | 79363 | 11161883 ~ 11162131 (-) |
| G1340646 | NA | non-coding | downstream | 90312 | 11150974 ~ 11151182 (-) |
| G1340634 | NA | non-coding | downstream | 101101 | 11140128 ~ 11140393 (-) |
| G1340626 | NA | non-coding | downstream | 107101 | 11134095 ~ 11134393 (-) |
| G1340625 | NA | non-coding | downstream | 107845 | 11133420 ~ 11133649 (-) |
| G1340766 | NA | non-coding | upstream | 543 | 11242355 ~ 11242615 (-) |
| G1340776 | NA | non-coding | upstream | 10467 | 11252279 ~ 11252499 (-) |
| G1340805 | NA | non-coding | upstream | 39189 | 11281001 ~ 11281217 (-) |
| G1340842 | NA | non-coding | upstream | 73168 | 11314980 ~ 11315216 (-) |
| G1340991 | NA | non-coding | upstream | 205977 | 11447789 ~ 11448021 (-) |
| G1340519 | NA | other | downstream | 216292 | 11024102 ~ 11025202 (-) |
| G1339765 | NA | other | downstream | 977752 | 10263274 ~ 10263742 (-) |
| G1339219 | NA | other | downstream | 1537863 | 9703116 ~ 9703631 (-) |
| LOC110491322 | LOC106589467 | other | downstream | 2102824 | 9133541 ~ 9138698 (-) |
| G1338014 | NA | other | downstream | 2771350 | 8467208 ~ 8470144 (-) |
| G1341480 | LOC106578921 | other | upstream | 748432 | 11946567 ~ 12097768 (-) |
| G1342941 | NA | other | upstream | 1457174 | 12698986 ~ 12700168 (-) |
| G1343278 | NA | other | upstream | 2009622 | 13251434 ~ 13251668 (-) |
| G1343452 | LOC106578962 | other | upstream | 2343324 | 13585136 ~ 13634178 (-) |
