G1343091


Basic Information

Item Value
gene id G1343091
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 13325854 ~ 13326937 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1535622
TGTGATGCGATCGTATGGCACTTGCAGCTGGTCAGCCATTTTCATCTGCACTCTTTTCATCTCTGCTGAGGCCTTGAAGAGGTGGACCTCTTCCAGGGCAGTTTGGTTGTTCTCTACGTCCTCAACAAATTTCTGACACTGGTCAAAGAATCTCATCAACTCATCGTTGATTTTGTGGCTGGGTCCAACTTCTGTCACGTTCCAAAGGTTGAGCAGGCCCTCTTGAAATGCTACAATGCTGTCCACGCATCTGTGTTTAGAGCTAGTGATGAAACGGATACGGTGGGCTCTGAGGTTTTCCTCGGATATCAGAGATGGAAACAATGTTGCCAACCTGACAGCCAGATGCCTATGGTCATCTCGCCCCTTCTCCACAAGCTTGCCATCCATGTCGTCGGTGTACCACATTTCCCACTTGGTTTTGATATCCTTCAGCCATTTATCAGTATTCATTGCCTCGTTTAGAACAAGGTCGTAAAGCCGTTGcatcatttttatatttttggtcGACGGATATCGTGTACCATGCCGAATAATGGCGGTCACATGAATTGCGGTGCTATTGGTACATCCTGGTTTTAAAAtggatttgtttttgtttaccgAGAGAATGTCATTAATGAGATAACGGTTAACCTCCTCATATCTGCCTTTCGTTCCAAAATGATTTGCAATCGCAGGTATGTTTGAATTGACGTTAGCATTTGCAACTGAGCAGTATGAAAACCTGGTCAAAGCAAGACTAAATGTAATGAACAACAAACTTTGTTTAGATAACGCAGTTGTCATTTCGTCAAATTAGTTGAGGTAGGAACAATTGATTATTTAACTACTAAACTAAGTTAGCTAAGCTATTGCATAGCTTcctgctttgttgttgttgttgtttcgcTGC

Function

NR:

description
multiple inositol polyphosphate phosphatase 1-like isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1535622 True 895 lncRNA 0.43 2 13325854 13326937

Neighbor

gene id symbol gene type direction distance location
LOC110491369 LOC106589397 coding downstream 82373 13059005 ~ 13243481 (-)
LOC110491368 LOC106578949 coding downstream 268895 13055138 ~ 13056959 (-)
LOC110492836 LOC106578942 coding downstream 792382 12454370 ~ 12533472 (-)
LOC110511413 NA coding downstream 875221 12449334 ~ 12505933 (-)
LOC110491391 LOC106578936 coding downstream 887447 12422693 ~ 12438407 (-)
LOC110491375 LOC106578956 coding upstream 18249 13345186 ~ 13356029 (-)
rnls rnls coding upstream 94209 13421146 ~ 13464395 (-)
ankrd22 ankrd22 coding upstream 155264 13482201 ~ 13491975 (-)
LOC110491380 acta2 coding upstream 181718 13508655 ~ 13516671 (-)
ch25h LOC106579045 coding upstream 218241 13545178 ~ 13546511 (-)
G1343095 NA non-coding downstream 41163 13284363 ~ 13284691 (-)
G1343289 NA non-coding downstream 44488 13281165 ~ 13281366 (-)
G1343288 NA non-coding downstream 44873 13280604 ~ 13280981 (-)
G1343285 NA non-coding downstream 47152 13278398 ~ 13278702 (-)
G1343283 NA non-coding downstream 63253 13261455 ~ 13262601 (-)
G1343088 LOC106578953 non-coding upstream 3284 13330221 ~ 13333362 (-)
G1343330 NA non-coding upstream 71667 13398604 ~ 13398840 (-)
G1343331 NA non-coding upstream 73094 13400031 ~ 13400325 (-)
G1343332 NA non-coding upstream 73919 13400856 ~ 13401124 (-)
G1343339 NA non-coding upstream 89488 13416425 ~ 13416648 (-)
G1343278 NA other downstream 74186 13251434 ~ 13251668 (-)
G1342941 NA other downstream 625686 12698986 ~ 12700168 (-)
G1341480 LOC106578921 other downstream 1306340 11946567 ~ 12097768 (-)
LOC110491342 LOC106578908 other downstream 1669291 11652429 ~ 11667766 (-)
G1340519 NA other downstream 2300652 11024102 ~ 11025202 (-)
G1343452 LOC106578962 other upstream 258199 13585136 ~ 13634178 (-)
G1345259 NA other upstream 1924440 15251377 ~ 15253570 (-)
G1345561 NA other upstream 2372048 15698985 ~ 15699263 (-)
G1347067 NA other upstream 3597585 16924522 ~ 16929432 (-)
G1347343 NA other upstream 3868393 17195330 ~ 17196129 (-)

Expression


Co-expression Network