Gene
RNA
| Item | Value |
|---|---|
| gene id | G1343448 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 13580031 ~ 13617732 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1535999 | True | 237 | lncRNA | 0.40 | 3 | 13580031 | 13617732 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ch25h | LOC106579045 | coding | downstream | 33520 | 13545178 ~ 13546511 (-) |
| LOC110491380 | acta2 | coding | downstream | 63360 | 13508655 ~ 13516671 (-) |
| ankrd22 | ankrd22 | coding | downstream | 88056 | 13482201 ~ 13491975 (-) |
| rnls | rnls | coding | downstream | 115636 | 13421146 ~ 13464395 (-) |
| LOC110491375 | LOC106578956 | coding | downstream | 224002 | 13345186 ~ 13356029 (-) |
| LOC110491395 | LOC106578965 | coding | upstream | 41649 | 13659381 ~ 13667159 (-) |
| LOC110491396 | LOC106578966 | coding | upstream | 69127 | 13686859 ~ 13698803 (-) |
| LOC110491398 | LOC106578967 | coding | upstream | 123461 | 13741193 ~ 13753444 (-) |
| LOC110492837 | LOC106578968 | coding | upstream | 140389 | 13758121 ~ 13764921 (-) |
| LOC110491403 | LOC106578980 | coding | upstream | 314290 | 13932022 ~ 13936223 (-) |
| G1343078 | NA | non-coding | downstream | 160436 | 13418177 ~ 13419595 (-) |
| G1343339 | NA | non-coding | downstream | 163383 | 13416425 ~ 13416648 (-) |
| G1343332 | NA | non-coding | downstream | 178907 | 13400856 ~ 13401124 (-) |
| G1343331 | NA | non-coding | downstream | 179706 | 13400031 ~ 13400325 (-) |
| G1343330 | NA | non-coding | downstream | 181191 | 13398604 ~ 13398840 (-) |
| G1343460 | NA | non-coding | upstream | 6232 | 13623964 ~ 13646365 (-) |
| G1343085 | NA | non-coding | upstream | 119252 | 13736984 ~ 13739703 (-) |
| G1343549 | NA | non-coding | upstream | 182972 | 13800704 ~ 13802846 (-) |
| G1343574 | NA | non-coding | upstream | 217122 | 13834854 ~ 13848085 (-) |
| G1343637 | NA | non-coding | upstream | 335593 | 13953325 ~ 13953548 (-) |
| G1343278 | NA | other | downstream | 328363 | 13251434 ~ 13251668 (-) |
| G1342941 | NA | other | downstream | 879863 | 12698986 ~ 12700168 (-) |
| G1341480 | LOC106578921 | other | downstream | 1560517 | 11946567 ~ 12097768 (-) |
| LOC110491342 | LOC106578908 | other | downstream | 1923468 | 11652429 ~ 11667766 (-) |
| G1340519 | NA | other | downstream | 2554829 | 11024102 ~ 11025202 (-) |
| G1345259 | NA | other | upstream | 1633645 | 15251377 ~ 15253570 (-) |
| G1345561 | NA | other | upstream | 2081253 | 15698985 ~ 15699263 (-) |
| G1347067 | NA | other | upstream | 3306790 | 16924522 ~ 16929432 (-) |
| G1347343 | NA | other | upstream | 3577598 | 17195330 ~ 17196129 (-) |
| LOC110491477 | psme3 | other | upstream | 3771653 | 17389099 ~ 17394265 (-) |
