Gene
RNA
| Item | Value |
|---|---|
| gene id | G1344558 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 14545481 ~ 14587304 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb2 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1537223 | True | 218 | lncRNA | 0.45 | 2 | 14545481 | 14587304 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939470 | NA | coding | downstream | 89764 | 14447197 ~ 14455717 (-) |
| dnajc9 | dnajc9 | coding | downstream | 328206 | 14213613 ~ 14217275 (-) |
| LOC110491408 | LOC106578977 | coding | downstream | 367311 | 14168129 ~ 14178170 (-) |
| LOC110491410 | LOC106578975 | coding | downstream | 384618 | 14147543 ~ 14160863 (-) |
| LOC110491406 | lgi1 | coding | downstream | 427441 | 14110577 ~ 14118040 (-) |
| LOC110491419 | LOC106578987 | coding | upstream | 408116 | 14995420 ~ 15041584 (-) |
| c16h10orf88 | cssa19h10orf88 | coding | upstream | 584824 | 15172128 ~ 15176318 (-) |
| LOC100136179 | LOC100500786 | coding | upstream | 604522 | 15191826 ~ 15196912 (-) |
| LOC110491429 | NA | coding | upstream | 614111 | 15201415 ~ 15215187 (-) |
| LOC110491427 | NA | coding | upstream | 618241 | 15205545 ~ 15212257 (-) |
| grid1b | LOC106578986 | non-coding | downstream | 27302 | 14517319 ~ 14907970 (-) |
| G1344258 | NA | non-coding | downstream | 32903 | 14512259 ~ 14512578 (-) |
| G1344256 | NA | non-coding | downstream | 34756 | 14510525 ~ 14510725 (-) |
| G1344253 | NA | non-coding | downstream | 36782 | 14508453 ~ 14508699 (-) |
| G1344251 | NA | non-coding | downstream | 37229 | 14507993 ~ 14508252 (-) |
| G1344585 | NA | non-coding | upstream | 868 | 14588172 ~ 14588401 (-) |
| G1344587 | NA | non-coding | upstream | 2606 | 14589910 ~ 14590122 (-) |
| G1344599 | NA | non-coding | upstream | 15196 | 14602500 ~ 14602949 (-) |
| G1344602 | NA | non-coding | upstream | 22673 | 14609977 ~ 14610206 (-) |
| G1344607 | NA | non-coding | upstream | 27761 | 14615065 ~ 14615419 (-) |
| G1343452 | LOC106578962 | other | downstream | 911303 | 13585136 ~ 13634178 (-) |
| G1343278 | NA | other | downstream | 1293813 | 13251434 ~ 13251668 (-) |
| G1342941 | NA | other | downstream | 1845313 | 12698986 ~ 12700168 (-) |
| G1341480 | LOC106578921 | other | downstream | 2525967 | 11946567 ~ 12097768 (-) |
| LOC110491342 | LOC106578908 | other | downstream | 2888918 | 11652429 ~ 11667766 (-) |
| G1345259 | NA | other | upstream | 664073 | 15251377 ~ 15253570 (-) |
| G1345561 | NA | other | upstream | 1111681 | 15698985 ~ 15699263 (-) |
| G1347067 | NA | other | upstream | 2337218 | 16924522 ~ 16929432 (-) |
| G1347343 | NA | other | upstream | 2608026 | 17195330 ~ 17196129 (-) |
| LOC110491477 | psme3 | other | upstream | 2802081 | 17389099 ~ 17394265 (-) |
