Gene
RNA
| Item | Value |
|---|---|
| gene id | G1344602 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 14609977 ~ 14610206 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1537267 | True | 230 | lncRNA | 0.39 | 1 | 14609977 | 14610206 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939470 | NA | coding | downstream | 154260 | 14447197 ~ 14455717 (-) |
| dnajc9 | dnajc9 | coding | downstream | 392702 | 14213613 ~ 14217275 (-) |
| LOC110491408 | LOC106578977 | coding | downstream | 431807 | 14168129 ~ 14178170 (-) |
| LOC110491410 | LOC106578975 | coding | downstream | 449114 | 14147543 ~ 14160863 (-) |
| LOC110491406 | lgi1 | coding | downstream | 491937 | 14110577 ~ 14118040 (-) |
| LOC110491419 | LOC106578987 | coding | upstream | 385214 | 14995420 ~ 15041584 (-) |
| c16h10orf88 | cssa19h10orf88 | coding | upstream | 561922 | 15172128 ~ 15176318 (-) |
| LOC100136179 | LOC100500786 | coding | upstream | 581620 | 15191826 ~ 15196912 (-) |
| LOC110491429 | NA | coding | upstream | 591209 | 15201415 ~ 15215187 (-) |
| LOC110491427 | NA | coding | upstream | 595339 | 15205545 ~ 15212257 (-) |
| G1344599 | NA | non-coding | downstream | 7028 | 14602500 ~ 14602949 (-) |
| G1344587 | NA | non-coding | downstream | 19855 | 14589910 ~ 14590122 (-) |
| G1344585 | NA | non-coding | downstream | 21576 | 14588172 ~ 14588401 (-) |
| G1344558 | NA | non-coding | downstream | 22673 | 14545481 ~ 14587304 (-) |
| grid1b | LOC106578986 | non-coding | downstream | 91798 | 14517319 ~ 14907970 (-) |
| G1344607 | NA | non-coding | upstream | 4859 | 14615065 ~ 14615419 (-) |
| G1344609 | NA | non-coding | upstream | 7919 | 14618125 ~ 14618515 (-) |
| G1344616 | NA | non-coding | upstream | 22981 | 14633187 ~ 14633395 (-) |
| G1344750 | NA | non-coding | upstream | 214508 | 14824714 ~ 14824965 (-) |
| G1344753 | NA | non-coding | upstream | 218850 | 14829056 ~ 14830294 (-) |
| G1343452 | LOC106578962 | other | downstream | 975799 | 13585136 ~ 13634178 (-) |
| G1343278 | NA | other | downstream | 1358309 | 13251434 ~ 13251668 (-) |
| G1342941 | NA | other | downstream | 1909809 | 12698986 ~ 12700168 (-) |
| G1341480 | LOC106578921 | other | downstream | 2590463 | 11946567 ~ 12097768 (-) |
| LOC110491342 | LOC106578908 | other | downstream | 2953414 | 11652429 ~ 11667766 (-) |
| G1345259 | NA | other | upstream | 641171 | 15251377 ~ 15253570 (-) |
| G1345561 | NA | other | upstream | 1088779 | 15698985 ~ 15699263 (-) |
| G1347067 | NA | other | upstream | 2314316 | 16924522 ~ 16929432 (-) |
| G1347343 | NA | other | upstream | 2585124 | 17195330 ~ 17196129 (-) |
| LOC110491477 | psme3 | other | upstream | 2779179 | 17389099 ~ 17394265 (-) |
