Gene
RNA
| Item | Value |
|---|---|
| gene id | G1344932 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 14973312 ~ 14973540 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC107662719 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1537616 | True | 229 | lncRNA | 0.38 | 1 | 14973312 | 14973540 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| grid1b | LOC106578986 | coding | downstream | 65342 | 14517319 ~ 14907970 (-) |
| LOC118939470 | NA | coding | downstream | 517595 | 14447197 ~ 14455717 (-) |
| dnajc9 | dnajc9 | coding | downstream | 756037 | 14213613 ~ 14217275 (-) |
| LOC110491408 | LOC106578977 | coding | downstream | 795142 | 14168129 ~ 14178170 (-) |
| LOC110491410 | LOC106578975 | coding | downstream | 812449 | 14147543 ~ 14160863 (-) |
| LOC110491419 | LOC106578987 | coding | upstream | 21880 | 14995420 ~ 15041584 (-) |
| c16h10orf88 | cssa19h10orf88 | coding | upstream | 198588 | 15172128 ~ 15176318 (-) |
| LOC100136179 | LOC100500786 | coding | upstream | 218286 | 15191826 ~ 15196912 (-) |
| LOC110491429 | NA | coding | upstream | 227875 | 15201415 ~ 15215187 (-) |
| LOC110491427 | NA | coding | upstream | 232005 | 15205545 ~ 15212257 (-) |
| G1344929 | NA | non-coding | downstream | 4814 | 14968245 ~ 14968498 (-) |
| G1344779 | NA | non-coding | downstream | 104119 | 14868959 ~ 14869193 (-) |
| G1344775 | NA | non-coding | downstream | 113029 | 14860057 ~ 14860283 (-) |
| G1344772 | NA | non-coding | downstream | 115353 | 14857734 ~ 14857959 (-) |
| G1344768 | NA | non-coding | downstream | 123239 | 14849851 ~ 14850073 (-) |
| G1344933 | NA | non-coding | upstream | 1638 | 14975178 ~ 14975400 (-) |
| G1344948 | NA | non-coding | upstream | 68592 | 15042132 ~ 15042678 (-) |
| G1344958 | NA | non-coding | upstream | 80178 | 15053718 ~ 15054035 (-) |
| G1345213 | NA | non-coding | upstream | 103529 | 15077069 ~ 15077300 (-) |
| G1345228 | NA | non-coding | upstream | 121777 | 15095317 ~ 15178961 (-) |
| G1343452 | LOC106578962 | other | downstream | 1339134 | 13585136 ~ 13634178 (-) |
| G1343278 | NA | other | downstream | 1721644 | 13251434 ~ 13251668 (-) |
| G1342941 | NA | other | downstream | 2273144 | 12698986 ~ 12700168 (-) |
| G1341480 | LOC106578921 | other | downstream | 2953798 | 11946567 ~ 12097768 (-) |
| LOC110491342 | LOC106578908 | other | downstream | 3316749 | 11652429 ~ 11667766 (-) |
| G1345259 | NA | other | upstream | 277837 | 15251377 ~ 15253570 (-) |
| G1345561 | NA | other | upstream | 725445 | 15698985 ~ 15699263 (-) |
| G1347067 | NA | other | upstream | 1950982 | 16924522 ~ 16929432 (-) |
| G1347343 | NA | other | upstream | 2221790 | 17195330 ~ 17196129 (-) |
| LOC110491477 | psme3 | other | upstream | 2415845 | 17389099 ~ 17394265 (-) |
