G1345259


Basic Information

Item Value
gene id G1345259
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 15251377 ~ 15253570 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1537992
CACCATTTGTTTATTTACTCAATAAGTCAATCATTTAAAAAGACAAACAACCCCCATTTGCATTCAAATGAAATGATCAAAAACCAAATGTTATGTTCACCATGCTGGCTTGCTTGCCAGAGCCCCGGTCTGTCTAAAAAGCCTTTAAATCACACATATCCCTCAACTCCGGTAGTGTTCCCTAAATATTCTGCGCATTACCGTACATACGACTCACACACACcggaagaatatatatatatatattcaggcATTTAATGCTATCCAGGCAACTTATCTTGTTGAGTTAGTGCATTGAATAATGATGTAACCAATGGCATTAACTTATTTTCTTAAGCGGAGATATTTGTAGTGATCCTTTGTGGCTCAGTTGATCAGAGCAACACGCTAGAAAAGCCAGGGTAGTGTGTTCTACTGCTGAGACCATCCATACGTAAAATGTACGCACGGAAGACTAAGTAGCTTTGGATAaaaacgtctgctaaatggcatatgttatagtagtaacacttATGGAAATCATGGCGATTATCAAAGATgtaacattataataacaataTCTGAAGGATGTGTCTGTTCACTTGGAAGAGTCACGTGAGAATTTTAATAGCAGTTATAATTCCAAAATAGATAAGAACCTTTCACCACTCTTCTTAAACATGAATTCAAGAAATTCCCAAAACACATAATGTTAGCAGTGGAAAATGTCAAAGAACTGGCTTAAACAACCACTGTATACTCTCTATACACGTAAAAGGAGTCTTCGTGTTGGATACTGGGGTATATTTAAACCAAACCATGTGAGATTAATAATTAAGCTTCTGGATATAGACAATATAATTCGACAGTAGGctgggattttttttgtttttatcttAGTATTTTTaaatttcttgttttttttctggTCTCAAACATCTGGACCGACAAAATGGCGCAGTCACCAACTCAATCTGACAAtgtatcggggggggtgtattagaAGACTTCAACGTAACTGATTTGCATTCACATGAGCATGCCAAACACAtttaacacatacaggtatatgaCCTGAGCATACCCATCTACCAGTggaggttgctgaggggaggatgactAATGATGGCTGGAACAGCGCTAATGGAATggcaaacacatagaaaccatgtgttttataccattccactcgagccattaccatgagcttgtcctccccaattaaggtgccaccaacctcctgtgccatCTACCCGTCTACTCCTGTCGACGTAAACACACGTAATCTTTCATATGGATTATGAGTAATGGTCAAGTCCGGCATTAGCTTGCAGCCAGGTGTACGATGCCTGACAGGTATGTCTCTCTACACCATGCAACTACCACATTACAAGTTGTTTATAGTAATTCTTGAATACAAATTACTACCTGCACCTGTGGAAGATGCATGGTATATGAGAAAAAGCAGCACTCCCTAGAATGAAAAGGgtttctttgttgttgttgtagtatccCAGGCTGATGTGTTATTTTACGAGTTGAATTATGACTGAAATGAATACACAGCCATTGAATCTTTTCTGTCCCTGTGGATGAGAGAAAATAAGTCCAGGGAAGGAAGGATTGCAGTTGCTCTCTTATCCTTTTTAAAGAAACAAACCTACACAGAAAATTGTCCAAAACGAAGAAACAAAAACTATATAAAAAACAAACATAACTCAAACGGAAGGAGTTTGCATTTTGGCGCAGTCCAGGCAGTGCTGAGGGGGATAGTTTGGCCTGCTCTTTGTTCGGGTTCTTGTTggatgtggaggggggggggtcagcctTGCACTACCCTGTGCTCTCAGTCCAGCTCAATGGGGCTGCCGTGCTCCTgtgcttcctctccctcctcatcctcaccCTCACCTGAGCCCATCAGGCTGTTCAACAGGTTTCCTAGCAATCCACCATATGATGAAGACTGTTTGGGTGGCACCCCGAAGAAAAGCTGTCCTATCCTGTCGAGATACTGATGCAGCAGGCAGTCAATGTAacaggaggggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1537992 True 2028 TUCP 0.41 3 15251377 15253570

Neighbor

gene id symbol gene type direction distance location
LOC110491429 NA coding downstream 36190 15201415 ~ 15215187 (-)
LOC110491427 NA coding downstream 39120 15205545 ~ 15212257 (-)
LOC100136179 LOC100500786 coding downstream 54465 15191826 ~ 15196912 (-)
c16h10orf88 cssa19h10orf88 coding downstream 75059 15172128 ~ 15176318 (-)
LOC110491419 LOC106578987 coding downstream 209793 14995420 ~ 15041584 (-)
vps35l NA coding upstream 1829 15255399 ~ 15258527 (-)
LOC110491431 LOC106578995 coding upstream 21236 15274806 ~ 15292329 (-)
LOC110491434 LOC106578998 coding upstream 68556 15322126 ~ 15350844 (-)
LOC110491435 LOC106578999 coding upstream 104738 15358308 ~ 15366530 (-)
LOC110491436 LOC106579001 coding upstream 115418 15368988 ~ 15372455 (-)
G1345287 NA non-coding downstream 15255 15234285 ~ 15236122 (-)
G1345285 NA non-coding downstream 17566 15233076 ~ 15233811 (-)
G1345284 NA non-coding downstream 25874 15225277 ~ 15225503 (-)
G1345223 NA non-coding downstream 26831 15209845 ~ 15224546 (-)
G1345228 NA non-coding downstream 72416 15095317 ~ 15178961 (-)
G1345304 NA non-coding upstream 3132 15256702 ~ 15308630 (-)
G1345357 NA non-coding upstream 129687 15383257 ~ 15383714 (-)
G1345358 NA non-coding upstream 137780 15391350 ~ 15393469 (-)
G1345359 NA non-coding upstream 154193 15407763 ~ 15408045 (-)
G1345360 NA non-coding upstream 154797 15408367 ~ 15408587 (-)
G1343452 LOC106578962 other downstream 1617199 13585136 ~ 13634178 (-)
G1343278 NA other downstream 1999709 13251434 ~ 13251668 (-)
G1342941 NA other downstream 2551209 12698986 ~ 12700168 (-)
G1341480 LOC106578921 other downstream 3231863 11946567 ~ 12097768 (-)
LOC110491342 LOC106578908 other downstream 3594814 11652429 ~ 11667766 (-)
G1345561 NA other upstream 445415 15698985 ~ 15699263 (-)
G1347067 NA other upstream 1670952 16924522 ~ 16929432 (-)
G1347343 NA other upstream 1941760 17195330 ~ 17196129 (-)
LOC110491477 psme3 other upstream 2135815 17389099 ~ 17394265 (-)
prr15lb atd4b other upstream 3164045 18417572 ~ 18423242 (-)

Expression


Co-expression Network