Gene
RNA
| Item | Value |
|---|---|
| gene id | G1345543 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 15657746 ~ 15661550 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: histidine-rich glycoprotein-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1538318 | True | 605 | lncRNA | 0.36 | 3 | 15657746 | 15661550 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491444 | LOC106579050 | coding | downstream | 58392 | 15596514 ~ 15599354 (-) |
| LOC110491442 | LOC106579006 | coding | downstream | 106841 | 15536008 ~ 15550905 (-) |
| LOC110491441 | LOC106579048 | coding | downstream | 132335 | 15523251 ~ 15525411 (-) |
| LOC110491439 | LOC106579003 | coding | downstream | 138459 | 15484379 ~ 15519287 (-) |
| LOC110492840 | LOC106579002 | coding | downstream | 201325 | 15435835 ~ 15462173 (-) |
| LOC110491446 | LOC106579012 | coding | upstream | 382694 | 16044244 ~ 16180566 (-) |
| usp22 | LOC106579013 | coding | upstream | 566208 | 16227758 ~ 16267876 (-) |
| cops3 | cops3 | coding | upstream | 607325 | 16268875 ~ 16282837 (-) |
| rasd1 | LOC106579016 | coding | upstream | 680606 | 16342156 ~ 16344306 (-) |
| pemt | pemt | coding | upstream | 692814 | 16354364 ~ 16435704 (-) |
| G1345475 | NA | non-coding | downstream | 91425 | 15560129 ~ 15566321 (-) |
| G1345412 | NA | non-coding | downstream | 137691 | 15519807 ~ 15520055 (-) |
| G1345374 | NA | non-coding | downstream | 174277 | 15483242 ~ 15483469 (-) |
| G1345371 | NA | non-coding | downstream | 175094 | 15481975 ~ 15482652 (-) |
| G1345547 | NA | non-coding | upstream | 5235 | 15666785 ~ 15667077 (-) |
| G1345583 | NA | non-coding | upstream | 69853 | 15731403 ~ 15731727 (-) |
| G1345594 | NA | non-coding | upstream | 85891 | 15747441 ~ 15747641 (-) |
| G1345609 | NA | non-coding | upstream | 102460 | 15764010 ~ 15764322 (-) |
| G1345619 | NA | non-coding | upstream | 108941 | 15770491 ~ 15770829 (-) |
| G1345259 | NA | other | downstream | 404176 | 15251377 ~ 15253570 (-) |
| G1343452 | LOC106578962 | other | downstream | 2023568 | 13585136 ~ 13634178 (-) |
| G1343278 | NA | other | downstream | 2406078 | 13251434 ~ 13251668 (-) |
| G1342941 | NA | other | downstream | 2957578 | 12698986 ~ 12700168 (-) |
| G1341480 | LOC106578921 | other | downstream | 3638232 | 11946567 ~ 12097768 (-) |
| G1345561 | NA | other | upstream | 37435 | 15698985 ~ 15699263 (-) |
| G1347067 | NA | other | upstream | 1262972 | 16924522 ~ 16929432 (-) |
| G1347343 | NA | other | upstream | 1533780 | 17195330 ~ 17196129 (-) |
| LOC110491477 | psme3 | other | upstream | 1727835 | 17389099 ~ 17394265 (-) |
| prr15lb | atd4b | other | upstream | 2756065 | 18417572 ~ 18423242 (-) |
