Gene
RNA
| Item | Value |
|---|---|
| gene id | G1345619 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 15770491 ~ 15770829 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1538394 | True | 339 | lncRNA | 0.33 | 1 | 15770491 | 15770829 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491444 | LOC106579050 | coding | downstream | 171137 | 15596514 ~ 15599354 (-) |
| LOC110491442 | LOC106579006 | coding | downstream | 219586 | 15536008 ~ 15550905 (-) |
| LOC110491441 | LOC106579048 | coding | downstream | 245080 | 15523251 ~ 15525411 (-) |
| LOC110491439 | LOC106579003 | coding | downstream | 251204 | 15484379 ~ 15519287 (-) |
| LOC110492840 | LOC106579002 | coding | downstream | 314070 | 15435835 ~ 15462173 (-) |
| LOC110491446 | LOC106579012 | coding | upstream | 273415 | 16044244 ~ 16180566 (-) |
| usp22 | LOC106579013 | coding | upstream | 456929 | 16227758 ~ 16267876 (-) |
| cops3 | cops3 | coding | upstream | 498046 | 16268875 ~ 16282837 (-) |
| rasd1 | LOC106579016 | coding | upstream | 571327 | 16342156 ~ 16344306 (-) |
| pemt | pemt | coding | upstream | 583535 | 16354364 ~ 16435704 (-) |
| G1345609 | NA | non-coding | downstream | 6169 | 15764010 ~ 15764322 (-) |
| G1345594 | NA | non-coding | downstream | 22850 | 15747441 ~ 15747641 (-) |
| G1345583 | NA | non-coding | downstream | 38764 | 15731403 ~ 15731727 (-) |
| G1345547 | NA | non-coding | downstream | 103414 | 15666785 ~ 15667077 (-) |
| G1345543 | NA | non-coding | downstream | 108941 | 15657746 ~ 15661550 (-) |
| G1345756 | NA | non-coding | upstream | 117091 | 15887920 ~ 15888136 (-) |
| G1345758 | NA | non-coding | upstream | 117554 | 15888383 ~ 15888622 (-) |
| G1345761 | NA | non-coding | upstream | 118609 | 15889438 ~ 15889693 (-) |
| G1345764 | NA | non-coding | upstream | 120725 | 15891554 ~ 15891983 (-) |
| G1345773 | NA | non-coding | upstream | 127958 | 15898787 ~ 15898997 (-) |
| G1345561 | NA | other | downstream | 71228 | 15698985 ~ 15699263 (-) |
| G1345259 | NA | other | downstream | 516921 | 15251377 ~ 15253570 (-) |
| G1343452 | LOC106578962 | other | downstream | 2136313 | 13585136 ~ 13634178 (-) |
| G1343278 | NA | other | downstream | 2518823 | 13251434 ~ 13251668 (-) |
| G1342941 | NA | other | downstream | 3070323 | 12698986 ~ 12700168 (-) |
| G1347067 | NA | other | upstream | 1153693 | 16924522 ~ 16929432 (-) |
| G1347343 | NA | other | upstream | 1424501 | 17195330 ~ 17196129 (-) |
| LOC110491477 | psme3 | other | upstream | 1618556 | 17389099 ~ 17394265 (-) |
| prr15lb | atd4b | other | upstream | 2646786 | 18417572 ~ 18423242 (-) |
| G1349366 | NA | other | upstream | 2863202 | 18634031 ~ 18634405 (-) |
