G1346487



Basic Information


Item Value
gene id G1346487
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 16472130 ~ 16472378 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1539318
gagtatttctgtatttgaatttggcgctctgcaatctcactggatgtcgctagcgtcccacataccctagagaggatacagaaacccaggctaaaaccccaaacagcaagaaactcagatgtagaagcacggtggcttgcaaaaactccctagaaaggctggaacctaggaagaaacctggagaggaaccaggctctgaggggtggccagtcctcttcttgctgtgccgggttgagattatgacagtac

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU1539318 True 249 lncRNA 0.50 1 16472130 16472378

Neighbor


gene id symbol gene type direction distance location
pemt pemt coding downstream 36426 16354364 ~ 16435704 (-)
rasd1 LOC106579016 coding downstream 127824 16342156 ~ 16344306 (-)
cops3 cops3 coding downstream 189293 16268875 ~ 16282837 (-)
usp22 LOC106579013 coding downstream 204254 16227758 ~ 16267876 (-)
LOC110491446 LOC106579012 coding downstream 291564 16044244 ~ 16180566 (-)
LOC118939491 NA coding upstream 23210 16495588 ~ 16497341 (-)
LOC110491454 LOC106579017 coding upstream 26748 16499126 ~ 16635552 (-)
lmf1 lmf1 coding upstream 181588 16653966 ~ 16681564 (-)
LOC110491459 LOC106579021 coding upstream 222836 16695214 ~ 16724979 (-)
LOC110491457 LOC103024569 coding upstream 256125 16728503 ~ 16733104 (-)
G1346479 NA non-coding downstream 8046 16463812 ~ 16464084 (-)
G1346475 NA non-coding downstream 13226 16458648 ~ 16458904 (-)
G1346471 NA non-coding downstream 16050 16455848 ~ 16456080 (-)
G1346470 NA non-coding downstream 17478 16454385 ~ 16454652 (-)
G1346463 NA non-coding downstream 23733 16448171 ~ 16448397 (-)
G1346897 NA non-coding upstream 85419 16557797 ~ 16559479 (-)
G1346904 NA non-coding upstream 106805 16579183 ~ 16580486 (-)
G1346971 NA non-coding upstream 221606 16693984 ~ 16695101 (-)
G1347109 NA non-coding upstream 416124 16888502 ~ 16895370 (-)
G1347067 NA non-coding upstream 452144 16924522 ~ 16929432 (-)
G1345561 NA other downstream 772867 15698985 ~ 15699263 (-)
G1345259 NA other downstream 1218560 15251377 ~ 15253570 (-)
G1343452 LOC106578962 other downstream 2837952 13585136 ~ 13634178 (-)
G1343278 NA other downstream 3220462 13251434 ~ 13251668 (-)
G1342941 NA other downstream 3771962 12698986 ~ 12700168 (-)
G1347343 NA other upstream 722952 17195330 ~ 17196129 (-)
LOC110491477 psme3 other upstream 917007 17389099 ~ 17394265 (-)
prr15lb atd4b other upstream 1945237 18417572 ~ 18423242 (-)
G1349366 NA other upstream 2161653 18634031 ~ 18634405 (-)

Expression



Co-expression Network