G1346904



Basic Information


Item Value
gene id G1346904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 16579183 ~ 16580486 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1539811
gaataacgaccgtgaagctataatgagaactgtgctgacacaagcaactaacatagacaatcacccacaaacaaacagtgaaacccaggctacctaagtatgattctcaatcagagactaatgacacctgcctctgattgagaaccatactaggccgaaacatagaaatcccaaaatcatagaaaaacaaacatagactgcccaccccaactcatgccctgaccatactaaataacg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1539811 True 237 lncRNA 0.42 2 16579183 16580486

Neighbor


gene id symbol gene type direction distance location
LOC118939491 NA coding downstream 81842 16495588 ~ 16497341 (-)
LOC118939490 NA coding downstream 103851 16461836 ~ 16475332 (-)
pemt pemt coding downstream 143479 16354364 ~ 16435704 (-)
rasd1 LOC106579016 coding downstream 234877 16342156 ~ 16344306 (-)
cops3 cops3 coding downstream 296346 16268875 ~ 16282837 (-)
lmf1 lmf1 coding upstream 73480 16653966 ~ 16681564 (-)
LOC110491459 LOC106579021 coding upstream 114728 16695214 ~ 16724979 (-)
LOC110491457 LOC103024569 coding upstream 148017 16728503 ~ 16733104 (-)
LOC110491465 LOC106579029 coding upstream 577828 17158314 ~ 17212112 (-)
LOC110491470 LOC106579340 coding upstream 725572 17306058 ~ 17352385 (-)
G1346897 NA non-coding downstream 19704 16557797 ~ 16559479 (-)
G1346487 NA non-coding downstream 106805 16472130 ~ 16472378 (-)
G1346479 NA non-coding downstream 115099 16463812 ~ 16464084 (-)
G1346475 NA non-coding downstream 120279 16458648 ~ 16458904 (-)
G1346471 NA non-coding downstream 123103 16455848 ~ 16456080 (-)
G1346971 NA non-coding upstream 113498 16693984 ~ 16695101 (-)
G1347109 NA non-coding upstream 308016 16888502 ~ 16895370 (-)
G1347067 NA non-coding upstream 344036 16924522 ~ 16929432 (-)
G1347148 NA non-coding upstream 368540 16949026 ~ 16949346 (-)
G1347183 NA non-coding upstream 409486 16989972 ~ 17046500 (-)
G1345561 NA other downstream 879920 15698985 ~ 15699263 (-)
G1345259 NA other downstream 1325613 15251377 ~ 15253570 (-)
G1343452 LOC106578962 other downstream 2945005 13585136 ~ 13634178 (-)
G1343278 NA other downstream 3327515 13251434 ~ 13251668 (-)
G1342941 NA other downstream 3879015 12698986 ~ 12700168 (-)
G1347343 NA other upstream 614844 17195330 ~ 17196129 (-)
LOC110491477 psme3 other upstream 808899 17389099 ~ 17394265 (-)
prr15lb atd4b other upstream 1837129 18417572 ~ 18423242 (-)
G1349366 NA other upstream 2053545 18634031 ~ 18634405 (-)

Expression



Co-expression Network