G1347148



Basic Information


Item Value
gene id G1347148
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 16949026 ~ 16949346 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1540099
cgtgaagcatggaggtggaaacatcattctttggggatgcttttctgcaaaggggacaggacgactgcaccgtattgaggggaggatggatagggccatgtatcgcgagatcttggccaacaacctccttctctcagtaagagcattgaagattggtcgtggctgggtcttccagcatgacaacgacccgaaacacacagccagggcaactaaggagtggctccgtaagaagcatctcaagttcatggagtggcctagccagtctccagacctgaacccaatagaaaatctttggagggagctgaaagtccatattgccca

Function


NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU1540099 True 321 lncRNA 0.51 1 16949026 16949346

Neighbor


gene id symbol gene type direction distance location
LOC110491457 LOC103024569 coding downstream 215922 16728503 ~ 16733104 (-)
LOC110491459 LOC106579021 coding downstream 224047 16695214 ~ 16724979 (-)
lmf1 lmf1 coding downstream 267462 16653966 ~ 16681564 (-)
LOC110491454 LOC106579017 coding downstream 313474 16499126 ~ 16635552 (-)
LOC118939491 NA coding downstream 451685 16495588 ~ 16497341 (-)
LOC110491465 LOC106579029 coding upstream 208968 17158314 ~ 17212112 (-)
LOC110491470 LOC106579340 coding upstream 356712 17306058 ~ 17352385 (-)
LOC110491471 LOC106579339 coding upstream 407049 17356395 ~ 17359630 (-)
LOC110491474 LOC106579337 coding upstream 427111 17376457 ~ 17380710 (-)
LOC110491477 psme3 coding upstream 440029 17389099 ~ 17394265 (-)
G1347067 NA non-coding downstream 22613 16924522 ~ 16929432 (-)
G1347109 NA non-coding downstream 53656 16888502 ~ 16895370 (-)
G1346971 NA non-coding downstream 253925 16693984 ~ 16695101 (-)
G1346904 NA non-coding downstream 368540 16579183 ~ 16580486 (-)
G1346897 NA non-coding downstream 389547 16557797 ~ 16559479 (-)
G1347183 NA non-coding upstream 40626 16989972 ~ 17046500 (-)
G1347244 NA non-coding upstream 116404 17065750 ~ 17066887 (-)
G1347269 NA non-coding upstream 150152 17099498 ~ 17100720 (-)
G1347348 NA non-coding upstream 210843 17160189 ~ 17160397 (-)
G1345561 NA other downstream 1249763 15698985 ~ 15699263 (-)
G1345259 NA other downstream 1695456 15251377 ~ 15253570 (-)
G1343452 LOC106578962 other downstream 3314848 13585136 ~ 13634178 (-)
G1343278 NA other downstream 3697358 13251434 ~ 13251668 (-)
G1347343 NA other upstream 245984 17195330 ~ 17196129 (-)
prr15lb atd4b other upstream 1468269 18417572 ~ 18423242 (-)
G1349366 NA other upstream 1684685 18634031 ~ 18634405 (-)
LOC110491541 LOC106579266 other upstream 2371524 19310970 ~ 19325094 (-)

Expression



Co-expression Network