Gene
RNA
| Item | Value |
|---|---|
| gene id | G1347244 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 17065750 ~ 17066887 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1540196 | True | 1095 | lncRNA | 0.33 | 2 | 17065750 | 17066887 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491457 | LOC103024569 | coding | downstream | 332646 | 16728503 ~ 16733104 (-) |
| LOC110491459 | LOC106579021 | coding | downstream | 340771 | 16695214 ~ 16724979 (-) |
| lmf1 | lmf1 | coding | downstream | 384186 | 16653966 ~ 16681564 (-) |
| LOC110491454 | LOC106579017 | coding | downstream | 430198 | 16499126 ~ 16635552 (-) |
| LOC118939491 | NA | coding | downstream | 568409 | 16495588 ~ 16497341 (-) |
| LOC110491465 | LOC106579029 | coding | upstream | 91427 | 17158314 ~ 17212112 (-) |
| LOC110491470 | LOC106579340 | coding | upstream | 239171 | 17306058 ~ 17352385 (-) |
| LOC110491471 | LOC106579339 | coding | upstream | 289508 | 17356395 ~ 17359630 (-) |
| LOC110491474 | LOC106579337 | coding | upstream | 309570 | 17376457 ~ 17380710 (-) |
| LOC110491477 | psme3 | coding | upstream | 322488 | 17389099 ~ 17394265 (-) |
| G1347183 | NA | non-coding | downstream | 19250 | 16989972 ~ 17046500 (-) |
| G1347148 | NA | non-coding | downstream | 116404 | 16949026 ~ 16949346 (-) |
| G1347067 | NA | non-coding | downstream | 139337 | 16924522 ~ 16929432 (-) |
| G1347109 | NA | non-coding | downstream | 170380 | 16888502 ~ 16895370 (-) |
| G1346971 | NA | non-coding | downstream | 370649 | 16693984 ~ 16695101 (-) |
| G1347269 | NA | non-coding | upstream | 32611 | 17099498 ~ 17100720 (-) |
| G1347348 | NA | non-coding | upstream | 93302 | 17160189 ~ 17160397 (-) |
| G1347357 | LOC106579032 | non-coding | upstream | 120003 | 17186890 ~ 17194727 (-) |
| G1347345 | arf1l | non-coding | upstream | 140258 | 17207145 ~ 17230708 (-) |
| G1345561 | NA | other | downstream | 1366487 | 15698985 ~ 15699263 (-) |
| G1345259 | NA | other | downstream | 1812180 | 15251377 ~ 15253570 (-) |
| G1343452 | LOC106578962 | other | downstream | 3431572 | 13585136 ~ 13634178 (-) |
| G1343278 | NA | other | downstream | 3814082 | 13251434 ~ 13251668 (-) |
| G1347343 | NA | other | upstream | 128443 | 17195330 ~ 17196129 (-) |
| prr15lb | atd4b | other | upstream | 1350728 | 18417572 ~ 18423242 (-) |
| G1349366 | NA | other | upstream | 1567144 | 18634031 ~ 18634405 (-) |
| LOC110491541 | LOC106579266 | other | upstream | 2253983 | 19310970 ~ 19325094 (-) |
