G1347269



Basic Information


Item Value
gene id G1347269
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 17099498 ~ 17100720 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1540226
cttcaaagtagccaccctttgccttgatgacagctttacacacctgttcattgaaatgcattccaagctactacctcatgaaactggttgagagaatgccaagagtgtgcaaagctgtcatcaaggcaaagggtggctacttcgaagaatctcaaatataaaatatattttgatttaacactttttcttACTgcgtgattccatgtgtg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1540226 True 209 lncRNA 0.40 2 17099498 17100720

Neighbor


gene id symbol gene type direction distance location
LOC110491457 LOC103024569 coding downstream 366394 16728503 ~ 16733104 (-)
LOC110491459 LOC106579021 coding downstream 374519 16695214 ~ 16724979 (-)
lmf1 lmf1 coding downstream 417934 16653966 ~ 16681564 (-)
LOC110491454 LOC106579017 coding downstream 463946 16499126 ~ 16635552 (-)
LOC118939491 NA coding downstream 602157 16495588 ~ 16497341 (-)
LOC110491465 LOC106579029 coding upstream 57594 17158314 ~ 17212112 (-)
LOC110491470 LOC106579340 coding upstream 205338 17306058 ~ 17352385 (-)
LOC110491471 LOC106579339 coding upstream 255675 17356395 ~ 17359630 (-)
LOC110491474 LOC106579337 coding upstream 275737 17376457 ~ 17380710 (-)
LOC110491477 psme3 coding upstream 288655 17389099 ~ 17394265 (-)
G1347244 NA non-coding downstream 32611 17065750 ~ 17066887 (-)
G1347183 NA non-coding downstream 52998 16989972 ~ 17046500 (-)
G1347148 NA non-coding downstream 150152 16949026 ~ 16949346 (-)
G1347067 NA non-coding downstream 173085 16924522 ~ 16929432 (-)
G1347109 NA non-coding downstream 204128 16888502 ~ 16895370 (-)
G1347348 NA non-coding upstream 59469 17160189 ~ 17160397 (-)
G1347357 LOC106579032 non-coding upstream 86170 17186890 ~ 17194727 (-)
G1347345 arf1l non-coding upstream 106425 17207145 ~ 17230708 (-)
G1347556 NA non-coding upstream 187275 17287995 ~ 17293635 (-)
G1345561 NA other downstream 1400235 15698985 ~ 15699263 (-)
G1345259 NA other downstream 1845928 15251377 ~ 15253570 (-)
G1343452 LOC106578962 other downstream 3465320 13585136 ~ 13634178 (-)
G1343278 NA other downstream 3847830 13251434 ~ 13251668 (-)
G1347343 NA other upstream 94610 17195330 ~ 17196129 (-)
prr15lb atd4b other upstream 1316895 18417572 ~ 18423242 (-)
G1349366 NA other upstream 1533311 18634031 ~ 18634405 (-)
LOC110491541 LOC106579266 other upstream 2220150 19310970 ~ 19325094 (-)

Expression



Co-expression Network