G1347348



Basic Information


Item Value
gene id G1347348
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 17160189 ~ 17160397 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1540323
cacgtTGATTCACCCAGATTAGTCTGGGTGAGAGAGACCACATCTCTCTTTCAAGAGAGACCTGTCCTTCAATCTTCCTACCACTTCTTTCTCAAAGTGATGACAGGACTTTTTGCCTCAGTGTACAACCTCCCTATGAGACTACTTTGAAGGGGACAGAACTGATTTGAATGTAGAACAGGTTTTGCTAAGGGAACAGTGTTATTAAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1540323 True 209 lncRNA 0.43 1 17160189 17160397

Neighbor


gene id symbol gene type direction distance location
LOC110491457 LOC103024569 coding downstream 427085 16728503 ~ 16733104 (-)
LOC110491459 LOC106579021 coding downstream 435210 16695214 ~ 16724979 (-)
lmf1 lmf1 coding downstream 478625 16653966 ~ 16681564 (-)
LOC110491454 LOC106579017 coding downstream 524637 16499126 ~ 16635552 (-)
LOC118939491 NA coding downstream 662848 16495588 ~ 16497341 (-)
LOC110491470 LOC106579340 coding upstream 145661 17306058 ~ 17352385 (-)
LOC110491471 LOC106579339 coding upstream 195998 17356395 ~ 17359630 (-)
LOC110491474 LOC106579337 coding upstream 216060 17376457 ~ 17380710 (-)
LOC110491477 psme3 coding upstream 228978 17389099 ~ 17394265 (-)
LOC110491488 NA coding upstream 387808 17548205 ~ 17569945 (-)
G1347269 NA non-coding downstream 59469 17099498 ~ 17100720 (-)
G1347244 NA non-coding downstream 93302 17065750 ~ 17066887 (-)
G1347183 NA non-coding downstream 113689 16989972 ~ 17046500 (-)
G1347148 NA non-coding downstream 210843 16949026 ~ 16949346 (-)
G1347067 NA non-coding downstream 233776 16924522 ~ 16929432 (-)
G1347357 LOC106579032 non-coding upstream 26493 17186890 ~ 17194727 (-)
G1347345 arf1l non-coding upstream 46748 17207145 ~ 17230708 (-)
G1347556 NA non-coding upstream 127598 17287995 ~ 17293635 (-)
G1347609 LOC106579335 non-coding upstream 245148 17405545 ~ 17407873 (-)
G1345561 NA other downstream 1460926 15698985 ~ 15699263 (-)
G1345259 NA other downstream 1906619 15251377 ~ 15253570 (-)
G1343452 LOC106578962 other downstream 3526011 13585136 ~ 13634178 (-)
G1343278 NA other downstream 3908521 13251434 ~ 13251668 (-)
G1347343 NA other upstream 34933 17195330 ~ 17196129 (-)
prr15lb atd4b other upstream 1257218 18417572 ~ 18423242 (-)
G1349366 NA other upstream 1473634 18634031 ~ 18634405 (-)
LOC110491541 LOC106579266 other upstream 2160473 19310970 ~ 19325094 (-)

Expression



Co-expression Network