Gene
RNA
| Item | Value |
|---|---|
| gene id | G1347357 |
| gene name | LOC106579032 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 17186890 ~ 17194727 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1540334 | True | 683 | lncRNA | 0.56 | 5 | 17186890 | 17194727 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491465 | LOC106579029 | coding | downstream | 12956 | 17158314 ~ 17212112 (-) |
| LOC110491457 | LOC103024569 | coding | downstream | 453786 | 16728503 ~ 16733104 (-) |
| LOC110491459 | LOC106579021 | coding | downstream | 461911 | 16695214 ~ 16724979 (-) |
| lmf1 | lmf1 | coding | downstream | 505326 | 16653966 ~ 16681564 (-) |
| LOC110491454 | LOC106579017 | coding | downstream | 551338 | 16499126 ~ 16635552 (-) |
| LOC110491470 | LOC106579340 | coding | upstream | 111331 | 17306058 ~ 17352385 (-) |
| LOC110491471 | LOC106579339 | coding | upstream | 161668 | 17356395 ~ 17359630 (-) |
| LOC110491474 | LOC106579337 | coding | upstream | 181730 | 17376457 ~ 17380710 (-) |
| LOC110491477 | psme3 | coding | upstream | 194648 | 17389099 ~ 17394265 (-) |
| LOC110491488 | NA | coding | upstream | 353478 | 17548205 ~ 17569945 (-) |
| G1347348 | NA | non-coding | downstream | 26493 | 17160189 ~ 17160397 (-) |
| G1347269 | NA | non-coding | downstream | 86170 | 17099498 ~ 17100720 (-) |
| G1347244 | NA | non-coding | downstream | 120003 | 17065750 ~ 17066887 (-) |
| G1347183 | NA | non-coding | downstream | 140390 | 16989972 ~ 17046500 (-) |
| G1347148 | NA | non-coding | downstream | 237544 | 16949026 ~ 16949346 (-) |
| G1347345 | arf1l | non-coding | upstream | 12418 | 17207145 ~ 17230708 (-) |
| G1347556 | NA | non-coding | upstream | 93268 | 17287995 ~ 17293635 (-) |
| G1347609 | LOC106579335 | non-coding | upstream | 210818 | 17405545 ~ 17407873 (-) |
| G1347067 | NA | other | downstream | 257458 | 16924522 ~ 16929432 (-) |
| G1345561 | NA | other | downstream | 1487627 | 15698985 ~ 15699263 (-) |
| G1345259 | NA | other | downstream | 1933320 | 15251377 ~ 15253570 (-) |
| G1343452 | LOC106578962 | other | downstream | 3552712 | 13585136 ~ 13634178 (-) |
| G1343278 | NA | other | downstream | 3935222 | 13251434 ~ 13251668 (-) |
| G1347343 | NA | other | upstream | 603 | 17195330 ~ 17196129 (-) |
| prr15lb | atd4b | other | upstream | 1222888 | 18417572 ~ 18423242 (-) |
| G1349366 | NA | other | upstream | 1439304 | 18634031 ~ 18634405 (-) |
| LOC110491541 | LOC106579266 | other | upstream | 2126143 | 19310970 ~ 19325094 (-) |
