Gene
RNA
| Item | Value |
|---|---|
| gene id | G1348173 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 17903427 ~ 17903688 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1541227 | True | 262 | lncRNA | 0.44 | 1 | 17903427 | 17903688 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491482 | LOC106579329 | coding | downstream | 34583 | 17713880 ~ 17868844 (-) |
| LOC110491487 | NA | coding | downstream | 175631 | 17722887 ~ 17727796 (-) |
| LOC110491480 | LOC106589300 | coding | downstream | 209345 | 17684471 ~ 17694082 (-) |
| LOC110492844 | LOC106589301 | coding | downstream | 220944 | 17671486 ~ 17682483 (-) |
| LOC110491488 | NA | coding | downstream | 333545 | 17548205 ~ 17569945 (-) |
| ormdl3 | LOC106579326 | coding | upstream | 77701 | 17981389 ~ 17983893 (-) |
| LOC110491491 | LOC106579324 | coding | upstream | 122826 | 18026514 ~ 18073389 (-) |
| LOC110491492 | LOC100380795 | coding | upstream | 176584 | 18080272 ~ 18088335 (-) |
| myo1d | LOC106579321 | coding | upstream | 195271 | 18098959 ~ 18222915 (-) |
| LOC110491495 | LOC106579322 | coding | upstream | 319796 | 18223484 ~ 18226919 (-) |
| G1348135 | NA | non-coding | downstream | 25811 | 17877387 ~ 17877616 (-) |
| G1348100 | NA | non-coding | downstream | 125515 | 17777538 ~ 17777912 (-) |
| G1348033 | NA | non-coding | downstream | 190700 | 17709411 ~ 17712727 (-) |
| G1348035 | NA | non-coding | downstream | 195059 | 17707549 ~ 17708368 (-) |
| G1348036 | NA | non-coding | downstream | 195961 | 17707119 ~ 17707466 (-) |
| G1348181 | NA | non-coding | upstream | 6433 | 17910121 ~ 17910352 (-) |
| G1348182 | NA | non-coding | upstream | 7222 | 17910910 ~ 17911206 (-) |
| G1348575 | NA | non-coding | upstream | 70893 | 17974581 ~ 17980256 (-) |
| G1348626 | NA | non-coding | upstream | 170680 | 18074368 ~ 18074619 (-) |
| G1348627 | NA | non-coding | upstream | 171465 | 18075153 ~ 18075400 (-) |
| LOC110491477 | psme3 | other | downstream | 511473 | 17389099 ~ 17394265 (-) |
| G1347343 | NA | other | downstream | 707298 | 17195330 ~ 17196129 (-) |
| G1347067 | NA | other | downstream | 973995 | 16924522 ~ 16929432 (-) |
| G1345561 | NA | other | downstream | 2204164 | 15698985 ~ 15699263 (-) |
| G1345259 | NA | other | downstream | 2649857 | 15251377 ~ 15253570 (-) |
| prr15lb | atd4b | other | upstream | 513927 | 18417572 ~ 18423242 (-) |
| G1349366 | NA | other | upstream | 730343 | 18634031 ~ 18634405 (-) |
| LOC110491541 | LOC106579266 | other | upstream | 1417182 | 19310970 ~ 19325094 (-) |
| G1349896 | NA | other | upstream | 1557353 | 19461041 ~ 19461815 (-) |
| LOC110491553 | LOC106579383 | other | upstream | 1788004 | 19691616 ~ 19697840 (-) |
