G1348669


Basic Information

Item Value
gene id G1348669
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 18163359 ~ 18164362 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1541787
TACTTCCTCTTTGTGGTGTGCCAggatcaaatcatatcaaatgtatttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaactccctagaaaggccaaaacctaggaagaaccctagagaggaaccaggagtGGTTACTTCCTCTTTGTGGTGTTCCAGGAGTGGTTACTTCCTCTTTGTGGTGTTCTAGGAGTGGTTACTTCCTctttgtggtgttccaggagtggttacttcctctttgtggtgttccaggagtggttacttcctctttgtggtgtgccaggagtggttacttcctctttgtggtgtgccaggagtggttacttcctctttgtggtgttccaggagtggttacttcctctttgtggtgtgccaggatcaaatcatatcaaatgtatttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggcta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1541787 True 577 lncRNA 0.46 2 18163359 18164362

Neighbor

gene id symbol gene type direction distance location
LOC110491492 LOC100380795 coding downstream 75024 18080272 ~ 18088335 (-)
LOC110491491 LOC106579324 coding downstream 89970 18026514 ~ 18073389 (-)
ormdl3 LOC106579326 coding downstream 179466 17981389 ~ 17983893 (-)
LOC110491482 LOC106579329 coding downstream 294515 17713880 ~ 17868844 (-)
LOC110491495 LOC106579322 coding upstream 59122 18223484 ~ 18226919 (-)
pdk2a LOC106579320 coding upstream 67164 18231526 ~ 18242110 (-)
LOC100136345 osbpl7 coding upstream 232115 18396477 ~ 18409234 (-)
mrpl10 mrpl10 coding upstream 245413 18409775 ~ 18412088 (-)
prr15lb atd4b coding upstream 253210 18417572 ~ 18423242 (-)
G1348631 NA non-coding downstream 66183 18096883 ~ 18097176 (-)
G1348630 NA non-coding downstream 67542 18092488 ~ 18095817 (-)
G1348629 NA non-coding downstream 84309 18078544 ~ 18079050 (-)
G1348627 NA non-coding downstream 87959 18075153 ~ 18075400 (-)
G1348626 NA non-coding downstream 88740 18074368 ~ 18074619 (-)
G1348689 NA non-coding upstream 34439 18198801 ~ 18199108 (-)
G1348784 NA non-coding upstream 169966 18334328 ~ 18334543 (-)
G1348800 tbx21 non-coding upstream 215171 18379533 ~ 18380412 (-)
G1348804 NA non-coding upstream 225884 18390246 ~ 18390523 (-)
G1348778 NA non-coding upstream 226409 18390771 ~ 18392168 (-)
LOC110491477 psme3 other downstream 771405 17389099 ~ 17394265 (-)
G1347343 NA other downstream 967230 17195330 ~ 17196129 (-)
G1347067 NA other downstream 1233927 16924522 ~ 16929432 (-)
G1345561 NA other downstream 2464096 15698985 ~ 15699263 (-)
G1345259 NA other downstream 2909789 15251377 ~ 15253570 (-)
G1349366 NA other upstream 469669 18634031 ~ 18634405 (-)
LOC110491541 LOC106579266 other upstream 1156508 19310970 ~ 19325094 (-)
G1349896 NA other upstream 1296679 19461041 ~ 19461815 (-)
LOC110491553 LOC106579383 other upstream 1527330 19691616 ~ 19697840 (-)

Expression


Co-expression Network