Gene
RNA
| Item | Value |
|---|---|
| gene id | G1348804 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 18390246 ~ 18390523 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1541935 | True | 278 | lncRNA | 0.40 | 1 | 18390246 | 18390523 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pdk2a | LOC106579320 | coding | downstream | 148136 | 18231526 ~ 18242110 (-) |
| LOC110491495 | LOC106579322 | coding | downstream | 163327 | 18223484 ~ 18226919 (-) |
| myo1d | LOC106579321 | coding | downstream | 167331 | 18098959 ~ 18222915 (-) |
| LOC110491492 | LOC100380795 | coding | downstream | 301911 | 18080272 ~ 18088335 (-) |
| LOC110491491 | LOC106579324 | coding | downstream | 316857 | 18026514 ~ 18073389 (-) |
| LOC100136345 | osbpl7 | coding | upstream | 5954 | 18396477 ~ 18409234 (-) |
| mrpl10 | mrpl10 | coding | upstream | 19252 | 18409775 ~ 18412088 (-) |
| prr15lb | atd4b | coding | upstream | 27049 | 18417572 ~ 18423242 (-) |
| si:ch211-194k22.8 | LOC106579386 | coding | upstream | 43662 | 18434185 ~ 18437208 (-) |
| cbx1b | cbx1 | coding | upstream | 57393 | 18447916 ~ 18457521 (-) |
| G1348800 | tbx21 | non-coding | downstream | 9834 | 18379533 ~ 18380412 (-) |
| G1348784 | NA | non-coding | downstream | 55703 | 18334328 ~ 18334543 (-) |
| G1348689 | NA | non-coding | downstream | 191138 | 18198801 ~ 18199108 (-) |
| G1348669 | NA | non-coding | downstream | 225884 | 18163359 ~ 18164362 (-) |
| G1348631 | NA | non-coding | downstream | 293070 | 18096883 ~ 18097176 (-) |
| G1348778 | NA | non-coding | upstream | 248 | 18390771 ~ 18392168 (-) |
| G1348858 | NA | non-coding | upstream | 123955 | 18514478 ~ 18514714 (-) |
| hoxb1b | hoxb1 | non-coding | upstream | 133656 | 18522453 ~ 18525045 (-) |
| LOC110491505 | hoxb3 | non-coding | upstream | 137652 | 18525206 ~ 18550690 (-) |
| G1349314 | NA | non-coding | upstream | 143031 | 18533554 ~ 18533859 (-) |
| LOC110491477 | psme3 | other | downstream | 998292 | 17389099 ~ 17394265 (-) |
| G1347343 | NA | other | downstream | 1194117 | 17195330 ~ 17196129 (-) |
| G1347067 | NA | other | downstream | 1460814 | 16924522 ~ 16929432 (-) |
| G1345561 | NA | other | downstream | 2690983 | 15698985 ~ 15699263 (-) |
| G1345259 | NA | other | downstream | 3136676 | 15251377 ~ 15253570 (-) |
| G1349366 | NA | other | upstream | 243508 | 18634031 ~ 18634405 (-) |
| LOC110491541 | LOC106579266 | other | upstream | 930347 | 19310970 ~ 19325094 (-) |
| G1349896 | NA | other | upstream | 1070518 | 19461041 ~ 19461815 (-) |
| LOC110491553 | LOC106579383 | other | upstream | 1301169 | 19691616 ~ 19697840 (-) |
