Gene
RNA
| Item | Value |
|---|---|
| gene id | G1349317 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 18538076 ~ 18538335 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1542520 | True | 260 | lncRNA | 0.32 | 1 | 18538076 | 18538335 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hoxb1b | hoxb1 | coding | downstream | 13031 | 18522453 ~ 18525045 (-) |
| LOC110491502 | skap1 | coding | downstream | 25663 | 18477077 ~ 18512413 (-) |
| cbx1b | cbx1 | coding | downstream | 80555 | 18447916 ~ 18457521 (-) |
| si:ch211-194k22.8 | LOC106579386 | coding | downstream | 100868 | 18434185 ~ 18437208 (-) |
| prr15lb | atd4b | coding | downstream | 114834 | 18417572 ~ 18423242 (-) |
| LOC110491507 | hoxb5 | coding | upstream | 2913 | 18541248 ~ 18543472 (-) |
| LOC110491508 | hoxb6ba | coding | upstream | 5629 | 18543964 ~ 18546172 (-) |
| LOC110492883 | hoxb8ba | coding | upstream | 12860 | 18551195 ~ 18552971 (-) |
| ttll6 | LOC106579309 | coding | upstream | 14841 | 18553176 ~ 18575510 (-) |
| snf8 | snf8 | coding | upstream | 57316 | 18595651 ~ 18603129 (-) |
| G1349314 | NA | non-coding | downstream | 4217 | 18533554 ~ 18533859 (-) |
| LOC110491505 | hoxb3 | non-coding | downstream | 8314 | 18525206 ~ 18550690 (-) |
| G1348858 | NA | non-coding | downstream | 23362 | 18514478 ~ 18514714 (-) |
| G1348778 | NA | non-coding | downstream | 145908 | 18390771 ~ 18392168 (-) |
| G1349329 | NA | non-coding | upstream | 18387 | 18556722 ~ 18557003 (-) |
| G1349340 | NA | non-coding | upstream | 40219 | 18578554 ~ 18578786 (-) |
| G1349342 | NA | non-coding | upstream | 40956 | 18579291 ~ 18579519 (-) |
| G1349346 | NA | non-coding | upstream | 45451 | 18583786 ~ 18584017 (-) |
| LOC110491477 | psme3 | other | downstream | 1146122 | 17389099 ~ 17394265 (-) |
| G1347343 | NA | other | downstream | 1341947 | 17195330 ~ 17196129 (-) |
| G1347067 | NA | other | downstream | 1608644 | 16924522 ~ 16929432 (-) |
| G1345561 | NA | other | downstream | 2838813 | 15698985 ~ 15699263 (-) |
| G1349366 | NA | other | upstream | 95696 | 18634031 ~ 18634405 (-) |
| LOC110491541 | LOC106579266 | other | upstream | 782535 | 19310970 ~ 19325094 (-) |
| G1349896 | NA | other | upstream | 922706 | 19461041 ~ 19461815 (-) |
| LOC110491553 | LOC106579383 | other | upstream | 1153357 | 19691616 ~ 19697840 (-) |
| LOC110491567 | LOC106579249 | other | upstream | 1792065 | 20330400 ~ 20334029 (-) |
