Gene
RNA
| Item | Value |
|---|---|
| gene id | G1349340 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 18578554 ~ 18578786 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109528343 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1542558 | True | 233 | lncRNA | 0.43 | 1 | 18578554 | 18578786 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ttll6 | LOC106579309 | coding | downstream | 3044 | 18553176 ~ 18575510 (-) |
| LOC110492883 | hoxb8ba | coding | downstream | 25583 | 18551195 ~ 18552971 (-) |
| LOC110491505 | hoxb3 | coding | downstream | 27864 | 18525206 ~ 18550690 (-) |
| LOC110491508 | hoxb6ba | coding | downstream | 32382 | 18543964 ~ 18546172 (-) |
| LOC110491507 | hoxb5 | coding | downstream | 35082 | 18541248 ~ 18543472 (-) |
| snf8 | snf8 | coding | upstream | 16865 | 18595651 ~ 18603129 (-) |
| LOC118939514 | LOC106579307 | coding | upstream | 26199 | 18604985 ~ 18606174 (-) |
| chmp2a | LOC106579304 | coding | upstream | 43847 | 18622633 ~ 18626440 (-) |
| LOC110491515 | LOC106579303 | coding | upstream | 93555 | 18672341 ~ 18679390 (-) |
| LOC110491517 | LOC106579299 | coding | upstream | 178781 | 18757567 ~ 18765534 (-) |
| G1349329 | NA | non-coding | downstream | 21551 | 18556722 ~ 18557003 (-) |
| G1349317 | NA | non-coding | downstream | 40219 | 18538076 ~ 18538335 (-) |
| G1349314 | NA | non-coding | downstream | 44695 | 18533554 ~ 18533859 (-) |
| G1349342 | NA | non-coding | upstream | 505 | 18579291 ~ 18579519 (-) |
| G1349346 | NA | non-coding | upstream | 5000 | 18583786 ~ 18584017 (-) |
| G1349347 | NA | non-coding | upstream | 5349 | 18584135 ~ 18584359 (-) |
| G1349349 | NA | non-coding | upstream | 6658 | 18585444 ~ 18585782 (-) |
| G1349308 | NA | non-coding | upstream | 15397 | 18594183 ~ 18595609 (-) |
| prr15lb | atd4b | other | downstream | 155368 | 18417572 ~ 18423242 (-) |
| LOC110491477 | psme3 | other | downstream | 1186600 | 17389099 ~ 17394265 (-) |
| G1347343 | NA | other | downstream | 1382425 | 17195330 ~ 17196129 (-) |
| G1347067 | NA | other | downstream | 1649122 | 16924522 ~ 16929432 (-) |
| G1345561 | NA | other | downstream | 2879291 | 15698985 ~ 15699263 (-) |
| G1349366 | NA | other | upstream | 55245 | 18634031 ~ 18634405 (-) |
| LOC110491541 | LOC106579266 | other | upstream | 742084 | 19310970 ~ 19325094 (-) |
| G1349896 | NA | other | upstream | 882255 | 19461041 ~ 19461815 (-) |
| LOC110491553 | LOC106579383 | other | upstream | 1112906 | 19691616 ~ 19697840 (-) |
| LOC110491567 | LOC106579249 | other | upstream | 1751614 | 20330400 ~ 20334029 (-) |
