Gene
RNA
| Item | Value |
|---|---|
| gene id | G1349342 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 18579291 ~ 18579519 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein K02A2.6-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1542560 | True | 229 | lncRNA | 0.39 | 1 | 18579291 | 18579519 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ttll6 | LOC106579309 | coding | downstream | 3781 | 18553176 ~ 18575510 (-) |
| LOC110492883 | hoxb8ba | coding | downstream | 26320 | 18551195 ~ 18552971 (-) |
| LOC110491505 | hoxb3 | coding | downstream | 28601 | 18525206 ~ 18550690 (-) |
| snf8 | snf8 | coding | upstream | 16132 | 18595651 ~ 18603129 (-) |
| LOC118939514 | LOC106579307 | coding | upstream | 25466 | 18604985 ~ 18606174 (-) |
| chmp2a | LOC106579304 | coding | upstream | 43114 | 18622633 ~ 18626440 (-) |
| LOC110491515 | LOC106579303 | coding | upstream | 92822 | 18672341 ~ 18679390 (-) |
| LOC110491517 | LOC106579299 | coding | upstream | 178048 | 18757567 ~ 18765534 (-) |
| G1349340 | NA | non-coding | downstream | 505 | 18578554 ~ 18578786 (-) |
| G1349329 | NA | non-coding | downstream | 22288 | 18556722 ~ 18557003 (-) |
| G1349317 | NA | non-coding | downstream | 40956 | 18538076 ~ 18538335 (-) |
| G1349314 | NA | non-coding | downstream | 45432 | 18533554 ~ 18533859 (-) |
| G1349346 | NA | non-coding | upstream | 4267 | 18583786 ~ 18584017 (-) |
| G1349347 | NA | non-coding | upstream | 4616 | 18584135 ~ 18584359 (-) |
| G1349349 | NA | non-coding | upstream | 5925 | 18585444 ~ 18585782 (-) |
| G1349308 | NA | non-coding | upstream | 14664 | 18594183 ~ 18595609 (-) |
| G1349353 | NA | non-coding | upstream | 40979 | 18620498 ~ 18621764 (-) |
| prr15lb | atd4b | other | downstream | 156105 | 18417572 ~ 18423242 (-) |
| LOC110491477 | psme3 | other | downstream | 1187337 | 17389099 ~ 17394265 (-) |
| G1347343 | NA | other | downstream | 1383162 | 17195330 ~ 17196129 (-) |
| G1347067 | NA | other | downstream | 1649859 | 16924522 ~ 16929432 (-) |
| G1345561 | NA | other | downstream | 2880028 | 15698985 ~ 15699263 (-) |
| G1349366 | NA | other | upstream | 54512 | 18634031 ~ 18634405 (-) |
| LOC110491541 | LOC106579266 | other | upstream | 741351 | 19310970 ~ 19325094 (-) |
| G1349896 | NA | other | upstream | 881522 | 19461041 ~ 19461815 (-) |
| LOC110491553 | LOC106579383 | other | upstream | 1112173 | 19691616 ~ 19697840 (-) |
| LOC110491567 | LOC106579249 | other | upstream | 1750881 | 20330400 ~ 20334029 (-) |
