Gene
RNA
| Item | Value |
|---|---|
| gene id | G1349349 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 18585444 ~ 18585782 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1542567 | True | 339 | lncRNA | 0.54 | 1 | 18585444 | 18585782 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ttll6 | LOC106579309 | coding | downstream | 9934 | 18553176 ~ 18575510 (-) |
| LOC110492883 | hoxb8ba | coding | downstream | 32473 | 18551195 ~ 18552971 (-) |
| LOC110491505 | hoxb3 | coding | downstream | 34754 | 18525206 ~ 18550690 (-) |
| snf8 | snf8 | coding | upstream | 9869 | 18595651 ~ 18603129 (-) |
| LOC118939514 | LOC106579307 | coding | upstream | 19203 | 18604985 ~ 18606174 (-) |
| chmp2a | LOC106579304 | coding | upstream | 36851 | 18622633 ~ 18626440 (-) |
| LOC110491515 | LOC106579303 | coding | upstream | 86559 | 18672341 ~ 18679390 (-) |
| LOC110491517 | LOC106579299 | coding | upstream | 171785 | 18757567 ~ 18765534 (-) |
| G1349347 | NA | non-coding | downstream | 1085 | 18584135 ~ 18584359 (-) |
| G1349346 | NA | non-coding | downstream | 1427 | 18583786 ~ 18584017 (-) |
| G1349342 | NA | non-coding | downstream | 5925 | 18579291 ~ 18579519 (-) |
| G1349340 | NA | non-coding | downstream | 6658 | 18578554 ~ 18578786 (-) |
| G1349308 | NA | non-coding | upstream | 8401 | 18594183 ~ 18595609 (-) |
| G1349353 | NA | non-coding | upstream | 34716 | 18620498 ~ 18621764 (-) |
| G1349316 | NA | non-coding | upstream | 41358 | 18627140 ~ 18628682 (-) |
| G1349365 | LOC106579302 | non-coding | upstream | 47725 | 18633507 ~ 18633849 (-) |
| G1349367 | LOC106579302 | non-coding | upstream | 48694 | 18634476 ~ 18634888 (-) |
| prr15lb | atd4b | other | downstream | 162258 | 18417572 ~ 18423242 (-) |
| LOC110491477 | psme3 | other | downstream | 1193490 | 17389099 ~ 17394265 (-) |
| G1347343 | NA | other | downstream | 1389315 | 17195330 ~ 17196129 (-) |
| G1347067 | NA | other | downstream | 1656012 | 16924522 ~ 16929432 (-) |
| G1345561 | NA | other | downstream | 2886181 | 15698985 ~ 15699263 (-) |
| G1349366 | NA | other | upstream | 48249 | 18634031 ~ 18634405 (-) |
| LOC110491541 | LOC106579266 | other | upstream | 735088 | 19310970 ~ 19325094 (-) |
| G1349896 | NA | other | upstream | 875259 | 19461041 ~ 19461815 (-) |
| LOC110491553 | LOC106579383 | other | upstream | 1105910 | 19691616 ~ 19697840 (-) |
| LOC110491567 | LOC106579249 | other | upstream | 1744618 | 20330400 ~ 20334029 (-) |
