G1349368


Basic Information

Item Value
gene id G1349368
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 18635269 ~ 18635891 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1542588
aacaatgaagtaccttgCTGTGATTTTAAATTGAAAacaatggtcaaaaagaaacaagtagcttcttagcaaagagcaattcctcgagcaagaattttgctatggCTGTCTGGGAGTGTTCTGACTGGGAAAACAGATAATTAGCTGTCATTGGCAGAAGTTTGGAACTCATTCTTATTgctctattaactaatttaccacacgGTGATGTCATCATCAAAGGCTAAAATGCCATTCAACCcaaacaggcagaaatttcaggcggtcttttcaaacagctcttgtTCTTTTAGTGTATTATAATAATTTAATGAAATcgttccaacctcagtgtggaaatacaTATAAAAACACAGGAAAATAATTTGACTGCATTGGACTGTTAATCTGTTTGCTAATTGTTGTCCACTTTTTCCTACATTGACTACTAGGCCCAAGTCTTCGCAGATAATGTCTTTATACTCACGCGTATCGTCTAGCAACTCAATCCTATACTACAAGCTTCCGTTGTAACCATTGCCATGATATATTCTATAATGTCACAGTTATACGGAGCATCTTACCCTGGGGTCTTTGGGCTGCAGGTGGTGAGGCACACCCCCCAGTCGAGCGGTCATCTCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1542588 True 623 lncRNA 0.39 1 18635269 18635891

Neighbor

gene id symbol gene type direction distance location
chmp2a LOC106579304 coding downstream 8829 18622633 ~ 18626440 (-)
LOC118939514 LOC106579307 coding downstream 29095 18604985 ~ 18606174 (-)
snf8 snf8 coding downstream 32140 18595651 ~ 18603129 (-)
ttll6 LOC106579309 coding downstream 59759 18553176 ~ 18575510 (-)
LOC110492883 hoxb8ba coding downstream 82298 18551195 ~ 18552971 (-)
LOC110491515 LOC106579303 coding upstream 36450 18672341 ~ 18679390 (-)
LOC110491517 LOC106579299 coding upstream 121676 18757567 ~ 18765534 (-)
LOC110491520 NA coding upstream 174025 18809916 ~ 18816182 (-)
acsf2 LOC106579292 coding upstream 187728 18823619 ~ 18853128 (-)
tap2t tap2a coding upstream 227131 18863022 ~ 18875578 (-)
G1349367 LOC106579302 non-coding downstream 381 18634476 ~ 18634888 (-)
G1349365 LOC106579302 non-coding downstream 1420 18633507 ~ 18633849 (-)
G1349316 NA non-coding downstream 6587 18627140 ~ 18628682 (-)
G1349353 NA non-coding downstream 13505 18620498 ~ 18621764 (-)
G1349308 NA non-coding downstream 39660 18594183 ~ 18595609 (-)
G1349378 NA non-coding upstream 18983 18654874 ~ 18655508 (-)
G1349431 NA non-coding upstream 109338 18745229 ~ 18782372 (-)
G1349460 NA non-coding upstream 161970 18797861 ~ 18799342 (-)
G1349462 NA non-coding upstream 166456 18802347 ~ 18802617 (-)
G1349466 NA non-coding upstream 173620 18809511 ~ 18809746 (-)
G1349366 NA other downstream 864 18634031 ~ 18634405 (-)
prr15lb atd4b other downstream 212083 18417572 ~ 18423242 (-)
LOC110491477 psme3 other downstream 1243315 17389099 ~ 17394265 (-)
G1347343 NA other downstream 1439140 17195330 ~ 17196129 (-)
G1347067 NA other downstream 1705837 16924522 ~ 16929432 (-)
LOC110491541 LOC106579266 other upstream 684979 19310970 ~ 19325094 (-)
G1349896 NA other upstream 825150 19461041 ~ 19461815 (-)
LOC110491553 LOC106579383 other upstream 1055801 19691616 ~ 19697840 (-)
LOC110491567 LOC106579249 other upstream 1694509 20330400 ~ 20334029 (-)
LOC110491585 NA other upstream 2004335 20640226 ~ 20650176 (-)

Expression


Co-expression Network