Gene
RNA
| Item | Value |
|---|---|
| gene id | G1349431 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 18745229 ~ 18782372 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1542659 | True | 616 | lncRNA | 0.46 | 2 | 18745229 | 18782372 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491515 | LOC106579303 | coding | downstream | 65839 | 18672341 ~ 18679390 (-) |
| chmp2a | LOC106579304 | coding | downstream | 118789 | 18622633 ~ 18626440 (-) |
| LOC118939514 | LOC106579307 | coding | downstream | 139055 | 18604985 ~ 18606174 (-) |
| snf8 | snf8 | coding | downstream | 142100 | 18595651 ~ 18603129 (-) |
| ttll6 | LOC106579309 | coding | downstream | 169719 | 18553176 ~ 18575510 (-) |
| LOC110491520 | NA | coding | upstream | 27544 | 18809916 ~ 18816182 (-) |
| acsf2 | LOC106579292 | coding | upstream | 41247 | 18823619 ~ 18853128 (-) |
| tap2t | tap2a | coding | upstream | 80650 | 18863022 ~ 18875578 (-) |
| slc16a5a | LOC106579290 | coding | upstream | 98030 | 18880402 ~ 18888619 (-) |
| kctd2 | LOC106589267 | coding | upstream | 116371 | 18898375 ~ 18909532 (-) |
| G1349378 | NA | non-coding | downstream | 89721 | 18654874 ~ 18655508 (-) |
| G1349368 | NA | non-coding | downstream | 109338 | 18635269 ~ 18635891 (-) |
| G1349367 | LOC106579302 | non-coding | downstream | 110341 | 18634476 ~ 18634888 (-) |
| G1349365 | LOC106579302 | non-coding | downstream | 111380 | 18633507 ~ 18633849 (-) |
| G1349316 | NA | non-coding | downstream | 116547 | 18627140 ~ 18628682 (-) |
| G1349460 | NA | non-coding | upstream | 15489 | 18797861 ~ 18799342 (-) |
| G1349462 | NA | non-coding | upstream | 19975 | 18802347 ~ 18802617 (-) |
| G1349466 | NA | non-coding | upstream | 27139 | 18809511 ~ 18809746 (-) |
| G1349473 | armc7 | non-coding | upstream | 34666 | 18817038 ~ 18821214 (-) |
| G1349366 | NA | other | downstream | 110824 | 18634031 ~ 18634405 (-) |
| prr15lb | atd4b | other | downstream | 322043 | 18417572 ~ 18423242 (-) |
| LOC110491477 | psme3 | other | downstream | 1353275 | 17389099 ~ 17394265 (-) |
| G1347343 | NA | other | downstream | 1549100 | 17195330 ~ 17196129 (-) |
| G1347067 | NA | other | downstream | 1815797 | 16924522 ~ 16929432 (-) |
| LOC110491541 | LOC106579266 | other | upstream | 538498 | 19310970 ~ 19325094 (-) |
| G1349896 | NA | other | upstream | 678669 | 19461041 ~ 19461815 (-) |
| LOC110491553 | LOC106579383 | other | upstream | 909320 | 19691616 ~ 19697840 (-) |
| LOC110491567 | LOC106579249 | other | upstream | 1548028 | 20330400 ~ 20334029 (-) |
| LOC110491585 | NA | other | upstream | 1857854 | 20640226 ~ 20650176 (-) |
