Gene
RNA
| Item | Value |
|---|---|
| gene id | G1349580 |
| gene name | LOC106579282 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 19105449 ~ 19106491 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: transmembrane protein 150A-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1542839 | True | 991 | lncRNA | 0.46 | 2 | 19105449 | 19106491 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491528 | LOC106579284 | coding | downstream | 82794 | 18955532 ~ 19022655 (-) |
| LOC110491527 | LOC106579286 | coding | downstream | 154805 | 18937855 ~ 18950644 (-) |
| kctd2 | LOC106589267 | coding | downstream | 195917 | 18898375 ~ 18909532 (-) |
| slc16a5a | LOC106579290 | coding | downstream | 216830 | 18880402 ~ 18888619 (-) |
| tap2t | tap2a | coding | downstream | 229871 | 18863022 ~ 18875578 (-) |
| LOC110491529 | LOC106579281 | coding | upstream | 548 | 19107039 ~ 19126035 (-) |
| LOC110491536 | lzts2 | coding | upstream | 58201 | 19164692 ~ 19210407 (-) |
| twnk | LOC106579274 | coding | upstream | 126460 | 19232951 ~ 19239241 (-) |
| sema4gb | sema4g | coding | upstream | 137619 | 19244110 ~ 19279335 (-) |
| LOC110491541 | LOC106579266 | coding | upstream | 204479 | 19310970 ~ 19325094 (-) |
| G1349597 | NA | non-coding | downstream | 40733 | 19059912 ~ 19064716 (-) |
| G1349569 | NA | non-coding | downstream | 75570 | 19029678 ~ 19029879 (-) |
| G1349568 | NA | non-coding | downstream | 76193 | 19028408 ~ 19029256 (-) |
| G1349563 | NA | non-coding | downstream | 81891 | 19023163 ~ 19023558 (-) |
| G1349530 | NA | non-coding | downstream | 150506 | 18952847 ~ 18954943 (-) |
| G1349624 | NA | non-coding | upstream | 4982 | 19111473 ~ 19149015 (-) |
| G1349640 | NA | non-coding | upstream | 45188 | 19151679 ~ 19194302 (-) |
| G1349700 | NA | non-coding | upstream | 115579 | 19222070 ~ 19222294 (-) |
| G1349647 | NA | non-coding | upstream | 133898 | 19240389 ~ 19240934 (-) |
| G1349645 | NA | non-coding | upstream | 134632 | 19241123 ~ 19242543 (-) |
| G1349366 | NA | other | downstream | 471044 | 18634031 ~ 18634405 (-) |
| prr15lb | atd4b | other | downstream | 682263 | 18417572 ~ 18423242 (-) |
| LOC110491477 | psme3 | other | downstream | 1713495 | 17389099 ~ 17394265 (-) |
| G1347343 | NA | other | downstream | 1909320 | 17195330 ~ 17196129 (-) |
| G1347067 | NA | other | downstream | 2176017 | 16924522 ~ 16929432 (-) |
| G1349896 | NA | other | upstream | 354550 | 19461041 ~ 19461815 (-) |
| LOC110491553 | LOC106579383 | other | upstream | 585201 | 19691616 ~ 19697840 (-) |
| LOC110491567 | LOC106579249 | other | upstream | 1223909 | 20330400 ~ 20334029 (-) |
| LOC110491585 | NA | other | upstream | 1533735 | 20640226 ~ 20650176 (-) |
