G1349718



Basic Information


Item Value
gene id G1349718
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 19263359 ~ 19263595 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1542996
acactgttatgtcgtcagcaaacttgatgacaggagggggctgagcacgcactctTGTgtggcccccatgttgaggatcagcatggcggaagTGTTGTtgtctaccttcaccacctggggtcggcctgtcaggaagtccaggacccagttgcacagagcggggtcaagacccagggccccgagcttagtgatgagcttggagggcactatggtgttgaaggctgagctgtaattaat

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1542996 True 237 lncRNA 0.56 1 19263359 19263595

Neighbor


gene id symbol gene type direction distance location
twnk LOC106579274 coding downstream 24118 19232951 ~ 19239241 (-)
LOC110491536 lzts2 coding downstream 52952 19164692 ~ 19210407 (-)
LOC110491529 LOC106579281 coding downstream 137324 19107039 ~ 19126035 (-)
LOC110491528 LOC106579284 coding downstream 240704 18955532 ~ 19022655 (-)
LOC110491527 LOC106579286 coding downstream 312715 18937855 ~ 18950644 (-)
LOC110491541 LOC106579266 coding upstream 47375 19310970 ~ 19325094 (-)
LOC110491543 LOC106579270 coding upstream 76731 19340326 ~ 19342139 (-)
LOC110491545 NA coding upstream 147923 19411518 ~ 19432319 (-)
LOC110491546 dlx3b coding upstream 173600 19437195 ~ 19439759 (-)
LOC110491548 LOC106579262 coding upstream 291497 19555092 ~ 19590896 (-)
G1349645 NA non-coding downstream 20816 19241123 ~ 19242543 (-)
G1349647 NA non-coding downstream 22425 19240389 ~ 19240934 (-)
G1349700 NA non-coding downstream 41065 19222070 ~ 19222294 (-)
G1349640 NA non-coding downstream 69057 19151679 ~ 19194302 (-)
G1349624 NA non-coding downstream 114344 19111473 ~ 19149015 (-)
G1349720 NA non-coding upstream 2594 19266189 ~ 19266436 (-)
G1349721 NA non-coding upstream 3082 19266677 ~ 19267100 (-)
G1349728 NA non-coding upstream 19543 19283138 ~ 19284148 (-)
G1349732 NA non-coding upstream 34131 19297726 ~ 19297932 (-)
G1349758 NA non-coding upstream 85016 19348611 ~ 19348908 (-)
G1349366 NA other downstream 628954 18634031 ~ 18634405 (-)
prr15lb atd4b other downstream 840173 18417572 ~ 18423242 (-)
LOC110491477 psme3 other downstream 1871405 17389099 ~ 17394265 (-)
G1347343 NA other downstream 2067230 17195330 ~ 17196129 (-)
G1347067 NA other downstream 2333927 16924522 ~ 16929432 (-)
G1349896 NA other upstream 197446 19461041 ~ 19461815 (-)
LOC110491553 LOC106579383 other upstream 428097 19691616 ~ 19697840 (-)
LOC110491567 LOC106579249 other upstream 1066805 20330400 ~ 20334029 (-)
LOC110491585 NA other upstream 1376631 20640226 ~ 20650176 (-)

Expression



Co-expression Network