G1349720



Basic Information


Item Value
gene id G1349720
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 19266189 ~ 19266436 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1542998
ctgggagactagtcaagatcgagggaaaaatgaacggagcaaagtacagagagatccttgatgaaaacctgctccagagcgctcaggacctccgcCTTGGGTGGAcgtccaccttccaacaggacaatgaccctaagcacacagccaagacaactcagaagtggctttaggacaagtctctgaatgtccttgagtggtccccAAATTATGcacacaaatacaggtgtgccaagcttgtagcatcatac

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1542998 True 248 lncRNA 0.50 1 19266189 19266436

Neighbor


gene id symbol gene type direction distance location
twnk LOC106579274 coding downstream 26948 19232951 ~ 19239241 (-)
LOC110491536 lzts2 coding downstream 55782 19164692 ~ 19210407 (-)
LOC110491529 LOC106579281 coding downstream 140154 19107039 ~ 19126035 (-)
LOC110491528 LOC106579284 coding downstream 243534 18955532 ~ 19022655 (-)
LOC110491527 LOC106579286 coding downstream 315545 18937855 ~ 18950644 (-)
LOC110491541 LOC106579266 coding upstream 44534 19310970 ~ 19325094 (-)
LOC110491543 LOC106579270 coding upstream 73890 19340326 ~ 19342139 (-)
LOC110491545 NA coding upstream 145082 19411518 ~ 19432319 (-)
LOC110491546 dlx3b coding upstream 170759 19437195 ~ 19439759 (-)
LOC110491548 LOC106579262 coding upstream 288656 19555092 ~ 19590896 (-)
G1349718 NA non-coding downstream 2594 19263359 ~ 19263595 (-)
G1349645 NA non-coding downstream 23646 19241123 ~ 19242543 (-)
G1349647 NA non-coding downstream 25255 19240389 ~ 19240934 (-)
G1349700 NA non-coding downstream 43895 19222070 ~ 19222294 (-)
G1349640 NA non-coding downstream 71887 19151679 ~ 19194302 (-)
G1349721 NA non-coding upstream 241 19266677 ~ 19267100 (-)
G1349728 NA non-coding upstream 16702 19283138 ~ 19284148 (-)
G1349732 NA non-coding upstream 31290 19297726 ~ 19297932 (-)
G1349758 NA non-coding upstream 82175 19348611 ~ 19348908 (-)
G1349820 NA non-coding upstream 134928 19401364 ~ 19401620 (-)
G1349366 NA other downstream 631784 18634031 ~ 18634405 (-)
prr15lb atd4b other downstream 843003 18417572 ~ 18423242 (-)
LOC110491477 psme3 other downstream 1874235 17389099 ~ 17394265 (-)
G1347343 NA other downstream 2070060 17195330 ~ 17196129 (-)
G1347067 NA other downstream 2336757 16924522 ~ 16929432 (-)
G1349896 NA other upstream 194605 19461041 ~ 19461815 (-)
LOC110491553 LOC106579383 other upstream 425256 19691616 ~ 19697840 (-)
LOC110491567 LOC106579249 other upstream 1063964 20330400 ~ 20334029 (-)
LOC110491585 NA other upstream 1373790 20640226 ~ 20650176 (-)

Expression



Co-expression Network