G1349285


Basic Information

Item Value
gene id G1349285
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 19298497 ~ 19298779 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1542474
tcaggtcagggattcaatccagcaaccttccggttactggcccaacgctctatcccctaagctacctgccgccggaggccactgtgttcttggggaccgtcaatgctgcagaaatattttggtacccttccccagatctgtgcttctacacaatcctatctcggccCTCTACGGACAgctcctttgacctcatggcttagtttttgctctgacatgcactgtcaactgtgtgaccttatatagacaggtgtgtgcctttccaaatcatgttcaatctattaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1542474 True 283 lncRNA 0.49 1 19298497 19298779

Neighbor

gene id symbol gene type direction distance location
LOC118939601 NA coding upstream 1268 19297114 ~ 19297229 (+)
mfsd13a LOC106579271 coding upstream 4230 19283071 ~ 19294267 (+)
mrpl43 mrpl43 coding upstream 57560 19239411 ~ 19240937 (+)
LOC110491535 pdzd7 coding upstream 133682 19150008 ~ 19164815 (+)
LOC110491533 LOC105006829 coding upstream 149481 19141975 ~ 19149016 (+)
LOC110491542 LOC106579267 coding downstream 26470 19325249 ~ 19340504 (+)
LOC110491544 dlx4b coding downstream 125332 19424111 ~ 19429658 (+)
itga3b itga3 coding downstream 193762 19492541 ~ 19549363 (+)
LOC110491549 LOC106579354 coding downstream 289587 19588366 ~ 19623529 (+)
LOC110491550 LOC106579260 coding downstream 325416 19624195 ~ 19629120 (+)
G1349286 NA non-coding upstream 577 19297590 ~ 19297920 (+)
G1349282 NA non-coding upstream 19091 19279059 ~ 19279406 (+)
G1349280 NA non-coding upstream 20506 19277763 ~ 19277991 (+)
G1349279 NA non-coding upstream 20830 19277200 ~ 19277667 (+)
G1349278 NA non-coding upstream 21744 19276511 ~ 19276753 (+)
G1349289 NA non-coding downstream 7845 19306624 ~ 19306844 (+)
G1349757 NA non-coding downstream 49844 19348623 ~ 19348852 (+)
G1349759 NA non-coding downstream 50350 19349129 ~ 19349453 (+)
G1349787 NA non-coding downstream 74471 19373250 ~ 19373469 (+)
G1349935 NA non-coding downstream 255467 19554246 ~ 19554562 (+)
LOC110491534 LOC105006846 other upstream 156820 19138817 ~ 19141680 (+)
LOC110491516 LOC106589273 other upstream 538077 18682058 ~ 18760420 (+)
G1348897 LOC106579309 other upstream 743045 18555177 ~ 18555452 (+)
LOC110491483 LOC106579330 other upstream 1695026 17596160 ~ 17623382 (+)
LOC110492842 LOC106579341 other upstream 2024517 17235828 ~ 17305959 (+)
G1350066 NA other downstream 438383 19737162 ~ 19738034 (+)
G1350275 NA other downstream 731951 20030730 ~ 20037978 (+)
G1351274 NA other downstream 1921986 21220765 ~ 21221147 (+)
G1351366 LOC106579206 other downstream 2103448 21402227 ~ 21405117 (+)
G1351501 LOC106579196 other downstream 2380445 21679224 ~ 21680881 (+)

Expression


Co-expression Network