G1349820



Basic Information


Item Value
gene id G1349820
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 19401364 ~ 19401620 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1543104
ctaaactttcagctcatacaaggagaatactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccatatgacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtagtttaaagtttgccacaagccacctgggagacacaccaaacatgttgaAG

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1543104 True 257 lncRNA 0.43 1 19401364 19401620

Neighbor


gene id symbol gene type direction distance location
LOC110491543 LOC106579270 coding downstream 59225 19340326 ~ 19342139 (-)
LOC110491541 LOC106579266 coding downstream 76270 19310970 ~ 19325094 (-)
sema4gb sema4g coding downstream 122029 19244110 ~ 19279335 (-)
twnk LOC106579274 coding downstream 162123 19232951 ~ 19239241 (-)
LOC110491536 lzts2 coding downstream 190957 19164692 ~ 19210407 (-)
LOC110491545 NA coding upstream 9898 19411518 ~ 19432319 (-)
LOC110491546 dlx3b coding upstream 35575 19437195 ~ 19439759 (-)
LOC110491548 LOC106579262 coding upstream 153472 19555092 ~ 19590896 (-)
mpp2b LOC106579259 coding upstream 234716 19636336 ~ 19691342 (-)
LOC110491553 LOC106579383 coding upstream 289996 19691616 ~ 19697840 (-)
G1349758 NA non-coding downstream 52456 19348611 ~ 19348908 (-)
G1349732 NA non-coding downstream 103432 19297726 ~ 19297932 (-)
G1349728 NA non-coding downstream 117216 19283138 ~ 19284148 (-)
G1349721 NA non-coding downstream 134264 19266677 ~ 19267100 (-)
G1349720 NA non-coding downstream 134928 19266189 ~ 19266436 (-)
G1349871 NA non-coding upstream 39321 19440941 ~ 19441203 (-)
G1349879 NA non-coding upstream 46667 19448287 ~ 19448554 (-)
G1349884 NA non-coding upstream 49620 19451240 ~ 19451546 (-)
G1349895 NA non-coding upstream 57298 19458918 ~ 19459259 (-)
G1349899 NA non-coding upstream 61898 19463518 ~ 19463744 (-)
G1349366 NA other downstream 766959 18634031 ~ 18634405 (-)
prr15lb atd4b other downstream 978178 18417572 ~ 18423242 (-)
LOC110491477 psme3 other downstream 2009410 17389099 ~ 17394265 (-)
G1347343 NA other downstream 2205235 17195330 ~ 17196129 (-)
G1349896 NA other upstream 59421 19461041 ~ 19461815 (-)
LOC110491567 LOC106579249 other upstream 928780 20330400 ~ 20334029 (-)
LOC110491585 NA other upstream 1238606 20640226 ~ 20650176 (-)
h3f3d LOC107388308 other upstream 1419079 20820699 ~ 20823171 (-)

Expression



Co-expression Network