G1349899



Basic Information


Item Value
gene id G1349899
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 19463518 ~ 19463744 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1543186
tttcaaggtcctggagtggcctagccagtctccagatctcaaccccatagaaaatctttggagggagttgaaagtccgtgttgcccagcaacagccccaaaacatcactgctctagaggagatcggcatggaggaatgggccaaaataccagcaacagtgtgtgaaaaccttgtgaagacttacagaaaacgtttgacctcagtcattgccaacaaagggtatataa

Function


NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA


RNA id representative length rna type GC content exon number start site end site
TU1543186 True 227 lncRNA 0.47 1 19463518 19463744

Neighbor


gene id symbol gene type direction distance location
LOC110491546 dlx3b coding downstream 23759 19437195 ~ 19439759 (-)
LOC110491545 NA coding downstream 31199 19411518 ~ 19432319 (-)
LOC110491543 LOC106579270 coding downstream 121379 19340326 ~ 19342139 (-)
LOC110491541 LOC106579266 coding downstream 138424 19310970 ~ 19325094 (-)
sema4gb sema4g coding downstream 184183 19244110 ~ 19279335 (-)
LOC110491548 LOC106579262 coding upstream 91348 19555092 ~ 19590896 (-)
mpp2b LOC106579259 coding upstream 172592 19636336 ~ 19691342 (-)
LOC110491553 LOC106579383 coding upstream 227872 19691616 ~ 19697840 (-)
tut1 tut1 coding upstream 249372 19713116 ~ 19720557 (-)
mki67 ki67 coding upstream 260090 19723834 ~ 19743882 (-)
G1349895 NA non-coding downstream 4259 19458918 ~ 19459259 (-)
G1349884 NA non-coding downstream 11972 19451240 ~ 19451546 (-)
G1349879 NA non-coding downstream 14964 19448287 ~ 19448554 (-)
G1349871 NA non-coding downstream 22315 19440941 ~ 19441203 (-)
G1349820 NA non-coding downstream 61898 19401364 ~ 19401620 (-)
G1349900 NA non-coding upstream 154 19463898 ~ 19464182 (-)
G1350361 NA non-coding upstream 14904 19478648 ~ 19516775 (-)
G1350408 NA non-coding upstream 89554 19553298 ~ 19553596 (-)
G1350445 NA non-coding upstream 168849 19632593 ~ 19633773 (-)
G1350450 NA non-coding upstream 179404 19643148 ~ 19643768 (-)
G1349896 NA other downstream 1703 19461041 ~ 19461815 (-)
G1349366 NA other downstream 829113 18634031 ~ 18634405 (-)
prr15lb atd4b other downstream 1040332 18417572 ~ 18423242 (-)
LOC110491477 psme3 other downstream 2071564 17389099 ~ 17394265 (-)
LOC110491567 LOC106579249 other upstream 866656 20330400 ~ 20334029 (-)
LOC110491585 NA other upstream 1176482 20640226 ~ 20650176 (-)
h3f3d LOC107388308 other upstream 1356955 20820699 ~ 20823171 (-)
G1352220 LOC106582599 other upstream 1745719 21209463 ~ 21210794 (-)

Expression



Co-expression Network