G1350361



Basic Information


Item Value
gene id G1350361
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 19478648 ~ 19516775 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1543711
ctaacacgaccagcagagggagacagggtgaagggaaaggacagagacaagacaacatgacagtacatgacacttaCcctacattattcatctcatatgcatacgtatatactgtactctatatcatcgacggtatccttatgtaatacatgtatcactagccactttatactatgccactttgtttacatactcatctcatttgtacatactgtactcgataccatctactgtatcttgcctatgctgctctgtaccatcactcattcatatatccttatgtacatattctttat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1543711 True 296 lncRNA 0.38 2 19478648 19516775

Neighbor


gene id symbol gene type direction distance location
LOC110491546 dlx3b coding downstream 38889 19437195 ~ 19439759 (-)
LOC110491545 NA coding downstream 46329 19411518 ~ 19432319 (-)
LOC110491543 LOC106579270 coding downstream 136509 19340326 ~ 19342139 (-)
LOC110491541 LOC106579266 coding downstream 153554 19310970 ~ 19325094 (-)
sema4gb sema4g coding downstream 199313 19244110 ~ 19279335 (-)
LOC110491548 LOC106579262 coding upstream 38317 19555092 ~ 19590896 (-)
mpp2b LOC106579259 coding upstream 119561 19636336 ~ 19691342 (-)
LOC110491553 LOC106579383 coding upstream 174841 19691616 ~ 19697840 (-)
tut1 tut1 coding upstream 196341 19713116 ~ 19720557 (-)
mki67 ki67 coding upstream 207059 19723834 ~ 19743882 (-)
G1349900 NA non-coding downstream 14466 19463898 ~ 19464182 (-)
G1349899 NA non-coding downstream 14904 19463518 ~ 19463744 (-)
G1349895 NA non-coding downstream 19389 19458918 ~ 19459259 (-)
G1349884 NA non-coding downstream 27102 19451240 ~ 19451546 (-)
G1349879 NA non-coding downstream 30094 19448287 ~ 19448554 (-)
G1350408 NA non-coding upstream 36523 19553298 ~ 19553596 (-)
G1350445 NA non-coding upstream 115818 19632593 ~ 19633773 (-)
G1350450 NA non-coding upstream 126373 19643148 ~ 19643768 (-)
G1350629 NA non-coding upstream 428576 19945351 ~ 20006240 (-)
G1350633 NA non-coding upstream 435451 19952226 ~ 20036837 (-)
G1349896 NA other downstream 16833 19461041 ~ 19461815 (-)
G1349366 NA other downstream 844243 18634031 ~ 18634405 (-)
prr15lb atd4b other downstream 1055462 18417572 ~ 18423242 (-)
LOC110491477 psme3 other downstream 2086694 17389099 ~ 17394265 (-)
LOC110491567 LOC106579249 other upstream 813625 20330400 ~ 20334029 (-)
LOC110491585 NA other upstream 1123451 20640226 ~ 20650176 (-)
h3f3d LOC107388308 other upstream 1303924 20820699 ~ 20823171 (-)
G1352220 LOC106582599 other upstream 1692688 21209463 ~ 21210794 (-)

Expression



Co-expression Network