G1350629


Basic Information

Item Value
gene id G1350629
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 19945351 ~ 20006240 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1544066
gactagtagtgtcatctgatagagaacagactagtagtgtcatctgatagagaacagactagtagtgtcatctgatagggaacagactagtagtgtcatctgatagagaacagactagtagtgtcatctgatagagaacagactagtagtgtcatctgatagggaacagactagtagtgtcatctgatagagaacagactagtagtgtcatctgatagagaacagactagtagtgtcatctgatagagaacagactagtagtgtcatctgatagagaacagactagtagtgtcatctgatagagaacagactagtagtgtcggaaggtcatctgacagggaacagactagtagtgtcatctgatagagaacagactagtagtgtcatctgatagggaacagactagtagtgtcggaaggtgggtgagattgttgtcatctgatagggaacagactagtagtgttggaaggtgggtgagattgttgtcatctgatagggaacagactagtagtgttggaaggtgggtgagattgttgtcatcattagtcatttaggtcaacattggatcattcagagatcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1544066 True 580 lncRNA 0.42 3 19945351 20006240

Neighbor

gene id symbol gene type direction distance location
mki67 ki67 coding downstream 201469 19723834 ~ 19743882 (-)
tut1 tut1 coding downstream 224794 19713116 ~ 19720557 (-)
LOC110491553 LOC106579383 coding downstream 247511 19691616 ~ 19697840 (-)
mpp2b LOC106579259 coding downstream 254009 19636336 ~ 19691342 (-)
LOC110491548 LOC106579262 coding downstream 354455 19555092 ~ 19590896 (-)
LOC110491558 LOC106579256 coding upstream 14455 20020695 ~ 20027330 (-)
top2a top2a coding upstream 24134 20030374 ~ 20054089 (-)
med24 med24 coding upstream 77518 20083758 ~ 20124534 (-)
kcnj12a LOC106579252 coding upstream 147441 20153681 ~ 20167642 (-)
LOC110491568 NA coding upstream 279569 20285809 ~ 20286964 (-)
G1350450 NA non-coding downstream 301583 19643148 ~ 19643768 (-)
G1350445 NA non-coding downstream 311578 19632593 ~ 19633773 (-)
G1350408 NA non-coding downstream 391755 19553298 ~ 19553596 (-)
G1350361 NA non-coding downstream 428576 19478648 ~ 19516775 (-)
G1349900 NA non-coding downstream 481169 19463898 ~ 19464182 (-)
G1350665 NA non-coding upstream 804 20007044 ~ 20007568 (-)
G1350698 NA non-coding upstream 50335 20056575 ~ 20056817 (-)
G1350761 NA non-coding upstream 187481 20193721 ~ 20193923 (-)
G1351772 LOC106583515 non-coding upstream 232635 20238875 ~ 20239098 (-)
G1349896 NA other downstream 483536 19461041 ~ 19461815 (-)
LOC110491541 LOC106579266 other downstream 620297 19310970 ~ 19325094 (-)
G1349366 NA other downstream 1310946 18634031 ~ 18634405 (-)
prr15lb atd4b other downstream 1522165 18417572 ~ 18423242 (-)
LOC110491567 LOC106579249 other upstream 324160 20330400 ~ 20334029 (-)
LOC110491585 NA other upstream 633986 20640226 ~ 20650176 (-)
h3f3d LOC107388308 other upstream 814459 20820699 ~ 20823171 (-)
G1352220 LOC106582599 other upstream 1203223 21209463 ~ 21210794 (-)
si:ch211-183d21.3 LOC106579210 other upstream 1254824 21255836 ~ 21288348 (-)

Expression


Co-expression Network