G1350633


Basic Information

Item Value
gene id G1350633
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 19952226 ~ 20036837 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1544070
actgtgtgaagactatttcttcctaacaaagacagccaacttcgccaaatggGGGAggatttaacaaaagcgcatttgcgaaaaaagcacaatcgttgcacgactgtacctaaccataaacatcaatgcctttcttaaaatcaatacacagaagtatatatttttaaacctgcatatttagctaaaagaaatccaagttagcaggcaatattaaccaggtgaaattgtgtcacttctcttgcgttcattgcacgcagagtcagggtatatgcaacagtttgggccgcctggctcgttgcgaactaattttccAGAAATTtccgtaattatgacataacattgaaggttgtgcaatgtaacaggaatacttagacttatggatgccatccgttagataaaatacagaacggttctgtatttcactgaaagaatgaacgttttgttttcgagatgatagtttccggattttaccatattaatgacctaaggctagtatttctgtgtgttatta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1544070 True 511 lncRNA 0.37 2 19952226 20036837

Neighbor

gene id symbol gene type direction distance location
mki67 ki67 coding downstream 208344 19723834 ~ 19743882 (-)
tut1 tut1 coding downstream 231669 19713116 ~ 19720557 (-)
LOC110491553 LOC106579383 coding downstream 254386 19691616 ~ 19697840 (-)
mpp2b LOC106579259 coding downstream 260884 19636336 ~ 19691342 (-)
LOC110491548 LOC106579262 coding downstream 361330 19555092 ~ 19590896 (-)
med24 med24 coding upstream 46921 20083758 ~ 20124534 (-)
kcnj12a LOC106579252 coding upstream 116844 20153681 ~ 20167642 (-)
LOC110491568 NA coding upstream 248972 20285809 ~ 20286964 (-)
LOC110491567 LOC106579249 coding upstream 293568 20330400 ~ 20334029 (-)
fam234a fam234a coding upstream 302272 20339109 ~ 20347491 (-)
G1350450 NA non-coding downstream 308458 19643148 ~ 19643768 (-)
G1350445 NA non-coding downstream 318453 19632593 ~ 19633773 (-)
G1350408 NA non-coding downstream 398630 19553298 ~ 19553596 (-)
G1350361 NA non-coding downstream 435451 19478648 ~ 19516775 (-)
G1349900 NA non-coding downstream 488044 19463898 ~ 19464182 (-)
G1350698 NA non-coding upstream 19738 20056575 ~ 20056817 (-)
G1350761 NA non-coding upstream 156884 20193721 ~ 20193923 (-)
G1351772 LOC106583515 non-coding upstream 202038 20238875 ~ 20239098 (-)
G1351773 NA non-coding upstream 203974 20240811 ~ 20241017 (-)
G1349896 NA other downstream 490411 19461041 ~ 19461815 (-)
LOC110491541 LOC106579266 other downstream 627172 19310970 ~ 19325094 (-)
G1349366 NA other downstream 1317821 18634031 ~ 18634405 (-)
prr15lb atd4b other downstream 1529040 18417572 ~ 18423242 (-)
LOC110491585 NA other upstream 603389 20640226 ~ 20650176 (-)
h3f3d LOC107388308 other upstream 783862 20820699 ~ 20823171 (-)
G1352220 LOC106582599 other upstream 1172626 21209463 ~ 21210794 (-)
si:ch211-183d21.3 LOC106579210 other upstream 1224227 21255836 ~ 21288348 (-)

Expression


Co-expression Network