G1351801



Basic Information


Item Value
gene id G1351801
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 20280098 ~ 20280366 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1545337
CGTAGCTGCCCAGAGGCTTCAGAGACGGGTAGGACTTGGCCGACCACATGGTTGGCACCTTGCCCACCACCATACTGTTGAAGACGTTCTCCAGCTCAGAAGACATCACCACCTGACCCTTGAGCGCCTTTCCAATGTTTATCAGACTGATGCGTACCACCTGAGTTAACCTGAGGGGGTCAAAGCATCATTATCAGCATGTTATGAACACATAATTGCTAATCCCAAATTCCCCATAGCCAAAAAGGCCTGTAATGATTGTGTAGTAA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1545337 True 269 lncRNA 0.49 1 20280098 20280366

Neighbor


gene id symbol gene type direction distance location
kcnj12a LOC106579252 coding downstream 112456 20153681 ~ 20167642 (-)
med24 med24 coding downstream 155564 20083758 ~ 20124534 (-)
top2a top2a coding downstream 226009 20030374 ~ 20054089 (-)
LOC110491558 LOC106579256 coding downstream 252768 20020695 ~ 20027330 (-)
raraa LOC100136372 coding downstream 310713 19752456 ~ 19969385 (-)
LOC110491568 NA coding upstream 5443 20285809 ~ 20286964 (-)
LOC110491567 LOC106579249 coding upstream 50039 20330400 ~ 20334029 (-)
fam234a fam234a coding upstream 58743 20339109 ~ 20347491 (-)
LOC110491569 LOC106579243 coding upstream 73516 20353882 ~ 20366564 (-)
LOC110491577 LOC106579241 coding upstream 180758 20461124 ~ 20469565 (-)
G1351798 NA non-coding downstream 3343 20276531 ~ 20276755 (-)
G1351797 dnah3 non-coding downstream 4314 20275541 ~ 20275784 (-)
G1351794 NA non-coding downstream 9039 20270824 ~ 20271059 (-)
G1351793 dnah3 non-coding downstream 9297 20270436 ~ 20270801 (-)
G1351790 NA non-coding downstream 13304 20266554 ~ 20266794 (-)
G1351802 NA non-coding upstream 61 20280427 ~ 20280767 (-)
G1351804 dnah3 non-coding upstream 460 20280826 ~ 20281256 (-)
G1351816 NA non-coding upstream 31059 20311425 ~ 20312434 (-)
G1351830 NA non-coding upstream 94886 20375252 ~ 20375533 (-)
G1351832 LOC106579242 non-coding upstream 97190 20377556 ~ 20386225 (-)
LOC110491553 LOC106579383 other downstream 582440 19691616 ~ 19697840 (-)
G1349896 NA other downstream 818283 19461041 ~ 19461815 (-)
LOC110491541 LOC106579266 other downstream 955044 19310970 ~ 19325094 (-)
G1349366 NA other downstream 1645693 18634031 ~ 18634405 (-)
prr15lb atd4b other downstream 1856912 18417572 ~ 18423242 (-)
LOC110491585 NA other upstream 359860 20640226 ~ 20650176 (-)
h3f3d LOC107388308 other upstream 540333 20820699 ~ 20823171 (-)
G1352220 LOC106582599 other upstream 929097 21209463 ~ 21210794 (-)
si:ch211-183d21.3 LOC106579210 other upstream 980698 21255836 ~ 21288348 (-)

Expression



Co-expression Network