G1351269


Basic Information

Item Value
gene id G1351269
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 21206385 ~ 21206612 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1544750
ggagcaggttgagagcttcaagttccttggtgttcatgttccaccaacaaactgtcatggtccaagacagtcatgaagagggcatgacaacgcctattccccctcaggagactgaaaatatttggcatgggtcctcagatcctcaaaaggttctacacctgcaccatcgagagcatcctgactggttgcatcgctgcctggtaaggcaactgctcggcctccgaccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1544750 True 228 lncRNA 0.52 1 21206385 21206612

Neighbor

gene id symbol gene type direction distance location
cluap1 cluap1 coding upstream 126278 21050726 ~ 21080107 (+)
LOC110491606 LOC106579217 coding upstream 280834 20924087 ~ 20925551 (+)
LOC118939519 NA coding upstream 318329 20885493 ~ 20888056 (+)
zgc:112496 LOC106579221 coding upstream 360694 20842992 ~ 20845691 (+)
anks3 anks3 coding upstream 374667 20826541 ~ 20831718 (+)
LOC110491616 rdh13 coding downstream 86918 21293530 ~ 21299993 (+)
decr2 decr2 coding downstream 94349 21300961 ~ 21306119 (+)
rab11fip3 rab11fip3 coding downstream 101140 21307752 ~ 21351756 (+)
ift140 ift140 coding downstream 168492 21375104 ~ 21430347 (+)
ccdc78 ccdc78 coding downstream 224554 21431166 ~ 21443552 (+)
G1351246 NA non-coding upstream 32071 21174005 ~ 21174314 (+)
G1351232 NA non-coding upstream 51423 21154742 ~ 21154962 (+)
G1351181 NA non-coding upstream 98802 21055118 ~ 21107583 (+)
G1351104 NA non-coding upstream 248109 20958011 ~ 20958276 (+)
G1351072 NA non-coding upstream 272500 20933468 ~ 20933885 (+)
G1351271 NA non-coding downstream 7645 21214257 ~ 21214521 (+)
G1351275 NA non-coding downstream 16121 21222733 ~ 21223064 (+)
G1351280 NA non-coding downstream 21676 21228288 ~ 21228556 (+)
G1351290 NA non-coding downstream 36960 21243572 ~ 21243840 (+)
G1351294 NA non-coding downstream 41839 21248451 ~ 21251177 (+)
G1350275 NA other upstream 1168407 20030730 ~ 20037978 (+)
G1350066 NA other upstream 1468351 19737162 ~ 19738034 (+)
LOC110491534 LOC105006846 other upstream 2064708 19138817 ~ 19141680 (+)
LOC110491516 LOC106589273 other upstream 2445965 18682058 ~ 18760420 (+)
G1348897 LOC106579309 other upstream 2650933 18555177 ~ 18555452 (+)
G1351274 NA other downstream 14153 21220765 ~ 21221147 (+)
G1351366 LOC106579206 other downstream 195615 21402227 ~ 21405117 (+)
G1351501 LOC106579196 other downstream 472612 21679224 ~ 21680881 (+)
LOC110491629 LOC106579195 other downstream 792745 21727617 ~ 22001169 (+)
G1353021 NA other downstream 1425267 22631879 ~ 22632305 (+)

Expression


Co-expression Network