G1351290


Basic Information

Item Value
gene id G1351290
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 21243572 ~ 21243840 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1544771
ggtcctagggctcaggtcctccgagagagagagagaaagaaagaaagagagaaagagagaattagagagagcatacttaaattcacacaagacaccggataagaaaggagaaatactccagatattctccagacacataaactactgcagcataaatactggaggctgagacaggaggggtcaggagacactgtggtcccGTCTGATGATAccaccggacagggccaaacaggcaggatataaccccacccactttgtcaaagcacagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1544771 True 269 lncRNA 0.48 1 21243572 21243840

Neighbor

gene id symbol gene type direction distance location
cluap1 cluap1 coding upstream 163465 21050726 ~ 21080107 (+)
LOC110491606 LOC106579217 coding upstream 318021 20924087 ~ 20925551 (+)
LOC118939519 NA coding upstream 355516 20885493 ~ 20888056 (+)
zgc:112496 LOC106579221 coding upstream 397881 20842992 ~ 20845691 (+)
anks3 anks3 coding upstream 411854 20826541 ~ 20831718 (+)
LOC110491616 rdh13 coding downstream 49690 21293530 ~ 21299993 (+)
decr2 decr2 coding downstream 57121 21300961 ~ 21306119 (+)
rab11fip3 rab11fip3 coding downstream 63912 21307752 ~ 21351756 (+)
ift140 ift140 coding downstream 131264 21375104 ~ 21430347 (+)
ccdc78 ccdc78 coding downstream 187326 21431166 ~ 21443552 (+)
G1351280 NA non-coding upstream 15016 21228288 ~ 21228556 (+)
G1351275 NA non-coding upstream 20508 21222733 ~ 21223064 (+)
G1351271 NA non-coding upstream 29051 21214257 ~ 21214521 (+)
G1351269 NA non-coding upstream 36960 21206385 ~ 21206612 (+)
G1351246 NA non-coding upstream 69258 21174005 ~ 21174314 (+)
G1351294 NA non-coding downstream 4611 21248451 ~ 21251177 (+)
G1351306 NA non-coding downstream 19559 21263399 ~ 21263720 (+)
G1351309 NA non-coding downstream 24394 21268234 ~ 21274373 (+)
G1351316 NA non-coding downstream 39716 21283556 ~ 21283788 (+)
G1351318 NA non-coding downstream 43725 21287565 ~ 21288350 (+)
G1351274 NA other upstream 22425 21220765 ~ 21221147 (+)
G1350275 NA other upstream 1205594 20030730 ~ 20037978 (+)
G1350066 NA other upstream 1505538 19737162 ~ 19738034 (+)
LOC110491534 LOC105006846 other upstream 2101895 19138817 ~ 19141680 (+)
LOC110491516 LOC106589273 other upstream 2483152 18682058 ~ 18760420 (+)
G1351366 LOC106579206 other downstream 158387 21402227 ~ 21405117 (+)
G1351501 LOC106579196 other downstream 435384 21679224 ~ 21680881 (+)
LOC110491629 LOC106579195 other downstream 755517 21727617 ~ 22001169 (+)
G1353021 NA other downstream 1388039 22631879 ~ 22632305 (+)
G1353519 NA other downstream 1801429 23045269 ~ 23045884 (+)

Expression


Co-expression Network