Gene
RNA
| Item | Value |
|---|---|
| gene id | G1352253 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 21265078 ~ 21265298 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1545837 | True | 221 | lncRNA | 0.46 | 1 | 21265078 | 21265298 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-183d21.1 | LOC106579212 | coding | downstream | 116735 | 21115777 ~ 21148343 (-) |
| nlrc3 | nlrc3 | coding | downstream | 159447 | 21081660 ~ 21105631 (-) |
| LOC110491613 | LOC106579376 | coding | downstream | 225115 | 21030381 ~ 21039963 (-) |
| wdr90 | wdr90 | coding | downstream | 238480 | 20968855 ~ 21026598 (-) |
| LOC110491609 | LOC106579377 | coding | downstream | 296337 | 20958937 ~ 20968741 (-) |
| tmem204 | LOC106579206 | coding | upstream | 139044 | 21404342 ~ 21414878 (-) |
| dlc2 | dlc2 | coding | upstream | 165102 | 21430400 ~ 21431098 (-) |
| metrn | metrn | coding | upstream | 216069 | 21481367 ~ 21488851 (-) |
| prr35 | LOC106579202 | coding | upstream | 258693 | 21523991 ~ 21531643 (-) |
| crp1 | LOC106579201 | coding | upstream | 298217 | 21563515 ~ 21566354 (-) |
| si:ch211-183d21.3 | LOC106579210 | non-coding | downstream | 4428 | 21255836 ~ 21288348 (-) |
| G1352234 | LOC106584099 | non-coding | downstream | 9393 | 21252460 ~ 21255685 (-) |
| G1352233 | NA | non-coding | downstream | 14205 | 21248551 ~ 21250873 (-) |
| G1352246 | NA | non-coding | downstream | 19418 | 21245411 ~ 21245660 (-) |
| G1352243 | NA | non-coding | downstream | 22937 | 21241771 ~ 21242141 (-) |
| G1352264 | NA | non-coding | upstream | 23096 | 21288394 ~ 21288608 (-) |
| G1352328 | ift140 | non-coding | upstream | 123661 | 21388959 ~ 21389531 (-) |
| G1352352 | ift140 | non-coding | upstream | 159017 | 21424315 ~ 21425334 (-) |
| G1352366 | NA | non-coding | upstream | 181842 | 21447140 ~ 21447409 (-) |
| G1352373 | NA | non-coding | upstream | 191351 | 21456649 ~ 21457002 (-) |
| G1352220 | LOC106582599 | other | downstream | 54284 | 21209463 ~ 21210794 (-) |
| h3f3d | LOC107388308 | other | downstream | 441956 | 20820699 ~ 20823171 (-) |
| LOC110491585 | NA | other | downstream | 618880 | 20640226 ~ 20650176 (-) |
| LOC110491567 | LOC106579249 | other | downstream | 931349 | 20330400 ~ 20334029 (-) |
| capn15 | LOC106579196 | other | upstream | 415131 | 21640601 ~ 21725046 (-) |
| G1352639 | LOC106579195 | other | upstream | 734653 | 21999951 ~ 22001156 (-) |
| G1353298 | NA | other | upstream | 1373733 | 22639031 ~ 22639812 (-) |
| G1353300 | NA | other | upstream | 1376116 | 22641414 ~ 22642102 (-) |
| G1353762 | NA | other | upstream | 1777951 | 23043249 ~ 23044761 (-) |
