G1352801


Basic Information

Item Value
gene id G1352801
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 22163989 ~ 22164338 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1546434
aacccggacaacactcgccccatggacctcccggtcgcagccggctgcaacagagcctgggcttgaacccagagtttctggtggcacagcttagaccactgctccacccgGGAGGCTCTCGAATGAGTCTTTGATCATATTTTTGCGATATTCCTACCTCGATACGTTTTTCATTTAACATAGGGTCTAACACATTTCtcctatttgtctgcctcttcagtccagggtgcattgcatggtgccATTGCGAATGTCATACTCCGCTCTGCGAGGCACatcgatctgcaggttgaacatggtgagattgtagactcctaaattgatTGTGCAGTTTGTTTAGGCGATTGTAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1546434 True 350 lncRNA 0.50 1 22163989 22164338

Neighbor

gene id symbol gene type direction distance location
ntn2 LOC106579193 coding upstream 19705 22081108 ~ 22144284 (+)
nog2 LOC106579194 coding upstream 126746 22034623 ~ 22037243 (+)
LOC110491629 LOC106579195 coding upstream 162820 21727617 ~ 22001169 (+)
LOC110492851 LOC106579353 coding upstream 553351 21609793 ~ 21610638 (+)
LOC110492885 LOC106579374 coding upstream 555175 21607897 ~ 21608814 (+)
atp6v0cb vatl coding downstream 153031 22317369 ~ 22329149 (+)
spsb3b LOC106579188 coding downstream 177976 22342314 ~ 22353831 (+)
mfsd1l mfsd1 coding downstream 193246 22357584 ~ 22366265 (+)
si:ch73-103b11.2 LOC106579185 coding downstream 204549 22368887 ~ 22475310 (+)
LOC110491641 LOC106579184 coding downstream 313828 22478166 ~ 22495374 (+)
G1352795 NA non-coding upstream 11162 22152600 ~ 22152827 (+)
G1352713 NA non-coding upstream 91191 22072482 ~ 22072798 (+)
G1352691 NA non-coding upstream 114303 22049406 ~ 22049686 (+)
G1352688 NA non-coding upstream 116560 22046906 ~ 22047429 (+)
G1352807 NA non-coding downstream 19093 22183431 ~ 22183769 (+)
G1352810 NA non-coding downstream 29977 22194315 ~ 22194860 (+)
G1352815 NA non-coding downstream 45310 22209648 ~ 22209860 (+)
G1352821 NA non-coding downstream 54134 22218472 ~ 22220231 (+)
G1352858 NA non-coding downstream 127105 22291443 ~ 22293474 (+)
G1351501 LOC106579196 other upstream 483108 21679224 ~ 21680881 (+)
G1351366 LOC106579206 other upstream 758872 21402227 ~ 21405117 (+)
G1351274 NA other upstream 942842 21220765 ~ 21221147 (+)
G1350275 NA other upstream 2126011 20030730 ~ 20037978 (+)
G1353021 NA other downstream 467541 22631879 ~ 22632305 (+)
G1353519 NA other downstream 880931 23045269 ~ 23045884 (+)
LOC110491658 LOC106579351 other downstream 959521 23123859 ~ 23134383 (+)
G1353660 NA other downstream 1134119 23298457 ~ 23298753 (+)
LOC110491671 LOC106579157 other downstream 1315751 23430867 ~ 23488782 (+)

Expression


Co-expression Network