G1353028


Basic Information

Item Value
gene id G1353028
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 22651205 ~ 22651955 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1546746
atatcagttatgttatactcacagacataatgttaacagttttagaaactttcgagtgttttctatccaaatcgaccaattatatgcatatcctagcttctgggcctgagtaacgggcagtttactttgggcacgcttttcatccgcacgtcaaaatactgccccctatcccaaatttaagaacaaattcttatttacaatgtaggcctaccaaaaggcaaaaggcctcctgtggggttgggggctgggattaaaaatataaataaattaaatataaatataggacaaaacatacatcacatcaagagagacaacacagcactacataaagagagacctaagacaacaacacagcaagcctgcaacacatgacaacacagcatggtagcaatacaacatgacaacacatggtagcaactcaacatggcagcaacacaacatggttgcAGCACAAAACAGTgtgcaaacattattgggcacagacagcagcgcaaagggcaagaaggtagagacaacaatacatcacgcaaagcagtcacaactgtcaacaagtgtccatgattgagtctttgaatgaagagattgagataaaactgtccagtttgagtctTTCAAGTCTCTAGCTGCAGctaactgaaaagacgagcgatccagggatgtgtgtgctttggggaactttaacagaatgtgactggtagaatgggtgttgtatgtgggggatgacggctgcagtagatatctcagatagggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1546746 True 751 lncRNA 0.42 1 22651205 22651955

Neighbor

gene id symbol gene type direction distance location
LOC110492853 NA coding upstream 69977 22576029 ~ 22581228 (+)
LOC110491640 LOC106579183 coding upstream 128167 22496064 ~ 22523038 (+)
LOC110491641 LOC106579184 coding upstream 155831 22478166 ~ 22495374 (+)
si:ch73-103b11.2 LOC106579185 coding upstream 175895 22368887 ~ 22475310 (+)
mfsd1l mfsd1 coding upstream 284940 22357584 ~ 22366265 (+)
lrrc4bb LOC106579180 coding downstream 6815 22658770 ~ 22670849 (+)
LOC110492854 LOC106579179 coding downstream 38353 22690308 ~ 22706146 (+)
si:ch211-234p6.5 LOC106579177 coding downstream 135874 22787829 ~ 22827477 (+)
LOC110491647 LOC106579176 coding downstream 183562 22828198 ~ 22876076 (+)
fgf21 LOC106579352 coding downstream 225302 22877257 ~ 22882635 (+)
G1353027 NA non-coding upstream 1802 22648850 ~ 22649403 (+)
G1353002 NA non-coding upstream 12050 22638733 ~ 22639155 (+)
G1353022 NA non-coding upstream 18574 22632348 ~ 22632631 (+)
G1352999 NA non-coding upstream 42213 22607674 ~ 22608992 (+)
G1352991 NA non-coding upstream 57621 22593313 ~ 22593584 (+)
G1353001 NA non-coding downstream 22850 22674805 ~ 22675561 (+)
G1353037 NA non-coding downstream 30099 22682054 ~ 22682338 (+)
G1353322 NA non-coding downstream 32170 22684125 ~ 22684439 (+)
G1353326 NA non-coding downstream 34908 22686863 ~ 22687106 (+)
G1353355 LOC106579178 non-coding downstream 69280 22721235 ~ 22722278 (+)
G1353021 NA other upstream 18900 22631879 ~ 22632305 (+)
LOC110491629 LOC106579195 other upstream 650954 21727617 ~ 22001169 (+)
G1351501 LOC106579196 other upstream 970324 21679224 ~ 21680881 (+)
G1351366 LOC106579206 other upstream 1246088 21402227 ~ 21405117 (+)
G1351274 NA other upstream 1430058 21220765 ~ 21221147 (+)
G1353519 NA other downstream 393314 23045269 ~ 23045884 (+)
LOC110491658 LOC106579351 other downstream 471904 23123859 ~ 23134383 (+)
G1353660 NA other downstream 646502 23298457 ~ 23298753 (+)
LOC110491671 LOC106579157 other downstream 828134 23430867 ~ 23488782 (+)
G1354668 NA other downstream 1341663 23993618 ~ 23995021 (+)

Expression


Co-expression Network